Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2352 ATGGAACAGAGAAGAACAAGAAGCTCCTCTTCTTGTCCTCTTCTTCTTCTTCTGCTTCTTCTGCTTCTCTGTTTCTCAGGATCTGTTAAGGCATACAAGAACCACACAGTGGGTGATTCTTTGGGTTGGTTTGATGTTCTTGAGAAGCCTACTGTCAATTACCAGAAATGGGTTTCTGGGAAAGAGTTCAGCTTGGGAGATTTCCTCATTTTCAACACAGACAACAACCACTCTGTGGTACAGACATACAATTTGACAACATACAAACTATGTGACTACGATGATGCACAAGACAGTGACACGACCCAGTGGTCGGCATCTGATCCATCTGCGACCGAGCCCCACCCGGTGACGGTGGCGGTGCCGCTGGTGAAGGAGGGGATGACATACTTCTTCTCCAGTGACTATGACGGTGAACAGTGTAAGAATGGGCAACACTTCAAGATCGATGTGACCTATGGACAAGGGTTGCCTAAGAGTTTGAGAAGTGCTCCTCAGGACTCTCCTTCTCCTGCTAGCCCTATTTCTGGGGACGATGATCCAGTGCCAGATACCATTGTTCCTTCTAACTTCAACAATCCCCATGAATCAGAAGAAAGTGATGATGGTGATGAGAAAGCTGAGAAATCTGGTTCTGTTTATGTGCAACTTCATGACACACTTGGAAAGTCCCTTGTTTTGCTAGGAATTGTTTTCTTGTTTGATTTGATGAGTTAA 717 0.4533 MEQRRTRSSSSCPLLLLLLLLLLCFSGSVKAYKNHTVGDSLGWFDVLEKPTVNYQKWVSGKEFSLGDFLIFNTDNNHSVVQTYNLTTYKLCDYDDAQDSDTTQWSASDPSATEPHPVTVAVPLVKEGMTYFFSSDYDGEQCKNGQHFKIDVTYGQGLPKSLRSAPQDSPSPASPISGDDDPVPDTIVPSNFNNPHESEESDDGDEKAEKSGSVYVQLHDTLGKSLVLLGIVFLFDLMS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2352 238 Gene3D - 31 153 IPR008972 -
Dere04g2352 238 MobiDBLite consensus disorder prediction 158 209 - -
Dere04g2352 238 FunFam Early nodulin-like protein 18 32 154 - -
Dere04g2352 238 PANTHER BLUE COPPER PROTEIN 33 169 IPR039391 GO:0009055
Dere04g2352 238 ProSiteProfiles Phytocyanin domain profile. 33 153 IPR003245 GO:0009055
Dere04g2352 238 SUPERFAMILY Cupredoxins 33 151 IPR008972 -
Dere04g2352 238 Pfam Plastocyanin-like domain 43 145 IPR003245 GO:0009055
Dere04g2352 238 MobiDBLite consensus disorder prediction 195 209 - -
Dere04g2352 238 MobiDBLite consensus disorder prediction 159 173 - -
Dere04g2352 238 CDD Phytocyanin 33 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2352 Dere-ChrDere04 28562986 28566990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2352 8 205 Phytocyanin Superfamily AT1G08500 61.194 2.15e-84 249