Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2343 ATGGGCAACTGTTGCTCTCAGAGCAACGACACCGATGCCCCGGCCGAAGCCGGTGATGCCACGGCAGAGGTCGCCAAGGGAGGATCCTTCGCCGACAACCCGCAGCACCCAGGCAACACCACCCATGATTCCGCAGGAGAAGGAGACGACAACCCGCCACCGACGAAACCATCCCCCGCCCAGTCCCCTTCGCCGCCCGCCAAGGCGGTCAAGACCGGCCCAATGGGCCCGGTCCTCCAGCGGCCGATGGAGGACGTGAAGGCCACGTACAGCATGGGGAAGGAGCTAGGAAGAGGGCAGTTCGGAGTGACCCATCTGTGCACGAACAAGGCCACAGGACAACAGTTCGCATGCAAGACGATCGCGAAGAGGAAGCTGACGAACAAGGAGGATATCGAGGACGTGAGGAGGGAGGTGCAGATCATGCACCACCTGGCGGGTCAGGGGAACGTGGTGGAGCTGAAGGGAGCGTACGAGGATAAGCATTCGGTGCATCTGGTAATGGAGCTGTGTGCCGGAGGAGAGCTGTTCGATCGGATAATAGCGAAGGGGCATTACACGGAGCGTGCAGCGGCGACGTTGATGAGGAGCATCGTGGAGATCGTCCACACGTGCCATTCCATGGGGGTGATACACAGAGATCTCAAGCCTGAGAATTTTCTCATGTTGAATAAGGACGAGGATTCTCCCGTTAAGGCTACGGATTTCGGCTTATCAGTTTTCTTCAAAGAAGGAGAGACATTTAAAGATATTGTGGGTAGTGCATATTATATTGCTCCTGAGGTATTGAAGAGGAAATATGGGCCAGAAGTTGATATATGGAGTATTGGTGTCATGTTGTACATTCTTCTTTGTGGCGTTCCTCCATTTTGGGCAGAATCTGAGCATGGCATCTTCAATGCCATCTTACGAGGCCACGTAGACTTTTCAACGGATCCATGGCCGTCCATATCAGCTTCAGCTAAAGATCTTGTGAAGAGGATGTTGAATTCTGATCCCAAGGCCAGGATCACAGCCTACCAAGTTCTAAATCATCCATGGATTAAGGAGGACGGAGAAGCACCTGATAAGCCTCTTGACAATGTTGTGTTCAACAGACTGAAACAGTTCAGAGCAATGAACCAATTCAAGAAAGCTGCTCTAAGGGTGATTGCTGGGTGCCTATCAGAGGAAGAAATCATGGGATTGAAAGAAATGTTCAAGAATATGGACACAGATGGAAGTGGAACCATTACAATAGAAGAGCTCAAGCAAGGGCTTACAACACAAGGCACAAAGCTCTCTGAACAAGAAGTTCAGCAATTAATGGATGCTGCCGATGCAGATGGCAATGGACTCATAGACTATGACGAGTTCATCGCAGCAACAGTGCACTTGAACCGAATGAACAAGGAAGAACATCTTTACACAGCCTTCCAATACTTTGATAAAGATAACAGCGGGTTCATCACCATTGAAGAACTAGATCAAGCTCTCCGTGATTTTAACATGCATGATGGCAGGGACATTAAAGAAATCATTTCAGAAATTGACGCAGATAATGATGGAAGGATAGACTACGAAGAGTTTGTGGCAATGATGAAAAAAGGAAACCCAGAAGCCATGACAGGCAAGAAGAGACGTGATTCATTTTTTACTTGCACGCTTACTTTTTGTCTCTTACCTCGTGCTTTGTTTTGCTGCATGCGTACCAATTGTTGTTATTTACTCAAAGTTGGCCTTTTGTGGATTCTTGGTCTAAGTTTCTTTAGTAACTTTGTGTTTGGGTGTACCATTGTTTATCTAGTTTCTGCTTGCTCTACTTTGTTTCGGTTAATTATGGCTATTTTGAGTCGTCAACGGATTCTTGCAAGTCACAATAAGGTGCTTGAATCTCTATCCCCTGTCGGCACTACAAGCAAGAATGCTCCTCGTATTTTAAGTGCTAGGCCGGACTCCCTGTCATCTGAATCTTCCAACTACAATCTAGAGGAGAATATTTCTCCTAATCAGGCGTATATCTTCCACTCAGCTGCTGATTCTCTATAG 2028 0.4783 MGNCCSQSNDTDAPAEAGDATAEVAKGGSFADNPQHPGNTTHDSAGEGDDNPPPTKPSPAQSPSPPAKAVKTGPMGPVLQRPMEDVKATYSMGKELGRGQFGVTHLCTNKATGQQFACKTIAKRKLTNKEDIEDVRREVQIMHHLAGQGNVVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYTERAAATLMRSIVEIVHTCHSMGVIHRDLKPENFLMLNKDEDSPVKATDFGLSVFFKEGETFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHVDFSTDPWPSISASAKDLVKRMLNSDPKARITAYQVLNHPWIKEDGEAPDKPLDNVVFNRLKQFRAMNQFKKAALRVIAGCLSEEEIMGLKEMFKNMDTDGSGTITIEELKQGLTTQGTKLSEQEVQQLMDAADADGNGLIDYDEFIAATVHLNRMNKEEHLYTAFQYFDKDNSGFITIEELDQALRDFNMHDGRDIKEIISEIDADNDGRIDYEEFVAMMKKGNPEAMTGKKRRDSFFTCTLTFCLLPRALFCCMRTNCCYLLKVGLLWILGLSFFSNFVFGCTIVYLVSACSTLFRLIMAILSRQRILASHNKVLESLSPVGTTSKNAPRILSARPDSLSSESSNYNLEENISPNQAYIFHSAADSL 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2343 675 SUPERFAMILY Protein kinase-like (PK-like) 75 376 IPR011009 -
Dere04g2343 675 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Dere04g2343 675 FunFam Calcium-dependent protein kinase 1 356 531 - -
Dere04g2343 675 SMART efh_1 431 459 IPR002048 GO:0005509
Dere04g2343 675 SMART efh_1 395 423 IPR002048 GO:0005509
Dere04g2343 675 SMART efh_1 467 495 IPR002048 GO:0005509
Dere04g2343 675 SMART efh_1 502 530 IPR002048 GO:0005509
Dere04g2343 675 FunFam Calcium-dependent protein kinase 1 92 175 - -
Dere04g2343 675 SMART serkin_6 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2343 675 ProSitePatterns EF-hand calcium-binding domain. 404 416 IPR018247 -
Dere04g2343 675 PANTHER SERINE/THREONINE-PROTEIN KINASE 84 523 - -
Dere04g2343 675 FunFam calcium-dependent protein kinase 1 176 355 - -
Dere04g2343 675 SUPERFAMILY EF-hand 388 528 IPR011992 -
Dere04g2343 675 ProSitePatterns Protein kinases ATP-binding region signature. 96 123 IPR017441 GO:0005524
Dere04g2343 675 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Dere04g2343 675 Gene3D - 389 457 - -
Dere04g2343 675 ProSiteProfiles Protein kinase domain profile. 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2343 675 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Dere04g2343 675 ProSiteProfiles EF-hand calcium-binding domain profile. 502 533 IPR002048 GO:0005509
Dere04g2343 675 Gene3D Transferase(Phosphotransferase) domain 1 176 366 - -
Dere04g2343 675 Pfam Protein kinase domain 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2343 675 CDD STKc_CAMK 90 347 - -
Dere04g2343 675 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
Dere04g2343 675 CDD EFh 396 455 IPR002048 GO:0005509
Dere04g2343 675 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Dere04g2343 675 Gene3D Phosphorylase Kinase; domain 1 92 175 - -
Dere04g2343 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Dere04g2343 675 Pfam EF-hand domain pair 465 528 IPR002048 GO:0005509
Dere04g2343 675 Pfam EF-hand domain pair 396 456 IPR002048 GO:0005509
Dere04g2343 675 Gene3D - 367 527 - -
Dere04g2343 675 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Dere04g2343 675 MobiDBLite consensus disorder prediction 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2343 Dere-ChrDere04 28402433 28414284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2343 1 544 EF-hand Containing Proteins AT5G12180 77.757 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere04g2343 Pkinase 2.1e-74 CL0016