Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2342 ATGCTCAGAGCTTCTCATTTCTCAATGATAGCATCTCCAGCTCTCAGTGCTCTGAGGCTTTCTTTGATACCCACTTTCACCTTCTCTTCTCCTTTGAACCATCACAATTTCTTCACTTTTTCTCCATCTCGGAGGTTTTTCCCCGATACCCACCCTTCTTCTCATCCTCTCACTTCCTTCAACTTCAAGCAGCTTCTTCCTATAATGGGGTTTCTGCGCCCCCAAGTAACAGCCTCATGTAGCACCAGTAGTAGTGCTGAAGGTGCTCGGGAGATCTTGGTGCAACATTTGCTTATTAAAGAAGATGACCAGAAGCTACTATTGGATCTTCAACAAAGAATCTCAGCAGGTGAAGACTTAAGTGATCTTGCTGTGGAATACTCTATTTGCCCATCCAAAGAAAAAGGAGGAATGCTTGGCTGGGTGAGAAAAGGGGAAATGGTTCCTGAATTTGAGGAGGCTGCATTTAATGCACCTTTAAACAAAGTTGTAAGGTGTAAAACAAAATTTGGATGGCACCTTCTTCAAGTTTTATCTGAGAGGGAAGAATATATACTTCAGGACATTCAACCTGATGAGCTTCATGCTAAAATTCAAGATCCCAACTTCATGGAGGAGGCACAACTGATTGATGTTCGAGAGCCTGAGGAAGTGGCAAAAGCATCCTTGCCAGGTTTTAAGGTTTTTCCCCTCCGACAATTTGGACATTGGGGACCTGCAATCACTACGACATTTGATCCTGACAAGGATACATATGTTTTGTGTCATCATGGCATGCGGTCATTGCAGGTTGCCCAGTGGTTGCAGTCACAGGGTTTTAAGAGAGTATACAATATATCTGGAGGAATCCATGCATATGCTGTGAAGGTTGATCCATCAATCCCTACTTACTAA 894 0.4329 MLRASHFSMIASPALSALRLSLIPTFTFSSPLNHHNFFTFSPSRRFFPDTHPSSHPLTSFNFKQLLPIMGFLRPQVTASCSTSSSAEGAREILVQHLLIKEDDQKLLLDLQQRISAGEDLSDLAVEYSICPSKEKGGMLGWVRKGEMVPEFEEAAFNAPLNKVVRCKTKFGWHLLQVLSEREEYILQDIQPDELHAKIQDPNFMEEAQLIDVREPEEVAKASLPGFKVFPLRQFGHWGPAITTTFDPDKDTYVLCHHGMRSLQVAQWLQSQGFKRVYNISGGIHAYAVKVDPSIPTY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2342 297 Pfam Rhodanese-like domain 191 287 IPR001763 -
Dere04g2342 297 Gene3D - 183 293 IPR036873 -
Dere04g2342 297 SUPERFAMILY FKBP-like 91 178 - -
Dere04g2342 297 CDD RHOD_2 188 291 - -
Dere04g2342 297 Gene3D - 86 182 IPR046357 GO:0003755
Dere04g2342 297 SMART rhod_4 189 292 IPR001763 -
Dere04g2342 297 ProSiteProfiles Rhodanese domain profile. 203 295 IPR001763 -
Dere04g2342 297 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 89 179 IPR000297 GO:0003755
Dere04g2342 297 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 186 295 IPR036873 -
Dere04g2342 297 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 297 - -
Dere04g2342 297 Pfam PPIC-type PPIASE domain 91 179 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2342 18 297 Sulfurtransferasese or Rhodanese AT5G19370 55.892 6.71e-109 316