Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2339 ATGGCAGAAACTGCAGTGAACATAGTGATTGATAAGTTGATTCCACTACTCAGGGACGAAGTCAAACTCCTCAGAGGCATTCATGAACAAATCACTTCCATCAAAGATGAGTTACAGTTGATAAAGGCCTACATAAAAGATGCAGACAAAAAGGTAGAAAGGACAGACACTAGTGGCATGGTGAAAGAGTGGGTGAAGCAAGTGAGAGAAGTTGCTTATCGCATACAAGATGTGATCGATGAATACTTGTTTAAAGTGGCAAAGCGTCGTCAAAAGCATGGACTTGTCAGTGTTGTTAGGAAATCTGGTTATTTGCTCAAAACCATAATACCGCGTCATGAGATAACATCTGAGATTGAGAACATCAGAGAATCACTAGTCAGACTCAATCAAGCAAGAGAGACGTTTGGATTCAACCCATCTGCGCCAGAATCAGGCACTCATATTGGAGCAGTGATGTCCACAAGACACGACCTTCGACAGGGTGCTCGTTTTATGGATGATGCTGAGCTTGTGGGAGTCGACCAAACTAGGGAAAAGCTCATGGGTTGGTTGTCAAACAGAGAAAGCAGACGCACTATAATTTCAGTGGTCGGCGAAGGCGGATTGGGTAAAACAACAATTGTGAATAATTTGTACAAGAAGCAAAAGGACAAAAGATCTTTTGATTGTTATGCTTGGATTACTGTTTCTCGTTCTCTTGAAGCAGAGAAGTTGTTAAAAACAATGATACAAAGGTTTTATGAGTCTGATGGGAACAAATCCGCTGCTATGGAAATTAATGAAATCATGGATAAGGATGTCTTGACTAGTAAACTTCGAGCATATTTACAAGGAAGGAGATATATGATTGTTTTTGATGATTTATGGGACATAGAGTTTTGGGGTAGTGTTGAATATGCGTTGCCAGATGACCATAAAAGCAGTAGGATAATGATTACCACAAGGGATAGAGGTGTCGCAGAATTCTGTAGACGTTTTGCTCCAGTCTACGTCCAAGAGTTAGAACCCTTGCCTCCAAAAGATTCTTTGCAACTCCTCCTTCTTAAGGTCTTTCAATTTGATGATTTTGAATTTTGTCCTGAAGAGTTGATAGGATTGTGTCAAGAATTTGTTAAGAAGTGCGATGGAGTGCCACTTGCAATTGTGGCTATTGCTGGTCTCTTATCAACTAAAAAAAAAGTTTTCTCGGAATGGCAAAGGGTACTAAATAGTCTTCACTCAAAGTTGACAAGTGATCCCCATCTGAGAGGTTACTATCAAGTCTTATCAGAAAGTTATAATGATCTTCCTTACCATCTCAAGTTGTGTCTCTTGTACTTCGGCCTTTTTCCGGAAGACTATTTCATTGGCTGTAGGAGACTCATTAATCTGTGGATAGCGGAGGGCTTTGTAAAGCAAAATAATGCAAATGAAGATCATACAACACTTGAGGAAGTGGCAGAAGAATACTTGGATGAACTAATTCGTAGGAGCTTGGTTAAAATATCAGAGGTGTATCCTTATGGCAGATTTCGAACATGTAGGGTACATGATTTGATGCACGACTTTATTCTTAAGAAGTGCGAGGAGATGAACTTTTGTCAAGTTAGTGAGGGATTTAGCTTCCATACGTTGACTAGACGCCTATCCATCCATACAAACTGTATTGATGCTTTACAAAGCCCGAAAGATTATGACAAAGTACGGTCTTGTTTTGTGTTTAATTGTAAAGAGTTGCCAAAGCCTATGGTTGAGTTATTGTTGTCAAGTTTTAAATTGTTAATTGGATTAGACTTGGAAGATGCACCACTTGATTATCTTCCTAAAGCAGTTGGAAATTTATTGCTTTTGAAATATTTAAGCATAAGAAATACAAAGATTAGAATCATTCCAAAGTTCATTGGGAAGCTTCAAAACTTGGAGACTCTGGACCTAAAAGATAGCTTGGTTCGTGAATTACCAGTTGAGATTAACAAGCTTGTCAAGTTGCGTGTTCTTCTAGCATATCCTTCTACGTTTGTAGGTGTTGGTTTGGAAAATATGGAAGGTATGAAATTAAAAGAAGGGATTGGGAGCTTAAGGGCTCTGCAGAAGCTAGCACAAATTGATATAACTGATGGGGATGGTGTTATCAATGATTTAAAGAATTTGAAGCAGTTAAGGAGATTGTCCATTACAAAGCTAGGAAGACACCAAGGGAAAAAATTATGCAAATCAATAGAGAGAATGAGCCATCTTTGCTCATTATCTATTGTGGCAGCTGGAGAGCATGAAGTTCTTGATTTGCAATCATTAAATGATCCTCCTATGAACTTGCAGCGCCTTTACCTTGATGGTCGTTTAGAGGGGCTTCCAGAATGGATTCCCAAACTTAAAAGTCTAGTTAAGTTGCGATTGAGTTGGTCAGGACTACGAGATGATCCACTTTCTGTCCTAAATAACTTACCGGAATTGTTGGAACTTTTGCTTTTCAATTCATATGAAGGTGATGAGCTTCATTTTAAAGACGGACATTTTAGAAAGCTGAAGAATTTGGAATTAGAGGGCATGCAAGGCTTAAGGACCTTAAAAATAGACAAAGGATCACTACCTTCCCTTAAAGCTTTGCAGTTGATTAGCTGTCCCCAATTGGTGGAGGTGCCCACTAGCATTCAGAATTTGGAAACTCTCAAAGTAATTCTCCTTGAAGAAATGCCTGATAAATTGATCACTAGTATGAAGTTGAAGGAAGGAGAAAGCTATGACAAGATTAAGAAAATTACCATGATTTCACTGAAGCTTAAGGAGTGA 2772 0.3882 MAETAVNIVIDKLIPLLRDEVKLLRGIHEQITSIKDELQLIKAYIKDADKKVERTDTSGMVKEWVKQVREVAYRIQDVIDEYLFKVAKRRQKHGLVSVVRKSGYLLKTIIPRHEITSEIENIRESLVRLNQARETFGFNPSAPESGTHIGAVMSTRHDLRQGARFMDDAELVGVDQTREKLMGWLSNRESRRTIISVVGEGGLGKTTIVNNLYKKQKDKRSFDCYAWITVSRSLEAEKLLKTMIQRFYESDGNKSAAMEINEIMDKDVLTSKLRAYLQGRRYMIVFDDLWDIEFWGSVEYALPDDHKSSRIMITTRDRGVAEFCRRFAPVYVQELEPLPPKDSLQLLLLKVFQFDDFEFCPEELIGLCQEFVKKCDGVPLAIVAIAGLLSTKKKVFSEWQRVLNSLHSKLTSDPHLRGYYQVLSESYNDLPYHLKLCLLYFGLFPEDYFIGCRRLINLWIAEGFVKQNNANEDHTTLEEVAEEYLDELIRRSLVKISEVYPYGRFRTCRVHDLMHDFILKKCEEMNFCQVSEGFSFHTLTRRLSIHTNCIDALQSPKDYDKVRSCFVFNCKELPKPMVELLLSSFKLLIGLDLEDAPLDYLPKAVGNLLLLKYLSIRNTKIRIIPKFIGKLQNLETLDLKDSLVRELPVEINKLVKLRVLLAYPSTFVGVGLENMEGMKLKEGIGSLRALQKLAQIDITDGDGVINDLKNLKQLRRLSITKLGRHQGKKLCKSIERMSHLCSLSIVAAGEHEVLDLQSLNDPPMNLQRLYLDGRLEGLPEWIPKLKSLVKLRLSWSGLRDDPLSVLNNLPELLELLLFNSYEGDELHFKDGHFRKLKNLELEGMQGLRTLKIDKGSLPSLKALQLISCPQLVEVPTSIQNLETLKVILLEEMPDKLITSMKLKEGESYDKIKKITMISLKLKE 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2339 923 Coils Coil 467 487 - -
Dere04g2339 923 Gene3D - 153 327 IPR027417 -
Dere04g2339 923 Pfam NB-ARC domain 175 427 IPR002182 GO:0043531
Dere04g2339 923 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 441 IPR027417 -
Dere04g2339 923 Gene3D - 426 522 IPR036388 -
Dere04g2339 923 Gene3D Ribonuclease Inhibitor 538 919 IPR032675 -
Dere04g2339 923 Coils Coil 112 132 - -
Dere04g2339 923 CDD RX-CC_like 2 124 IPR038005 -
Dere04g2339 923 Pfam Rx N-terminal domain 5 94 IPR041118 -
Dere04g2339 923 SUPERFAMILY L domain-like 509 893 - -
Dere04g2339 923 Gene3D - 338 425 IPR042197 -
Dere04g2339 923 FunFam Probable disease resistance protein At1g63360 427 520 - -
Dere04g2339 923 PANTHER DISEASE RESISTANCE PROTEIN RP 34 841 IPR044974 GO:0006952
Dere04g2339 923 PRINTS Disease resistance protein signature 276 290 - -
Dere04g2339 923 PRINTS Disease resistance protein signature 375 389 - -
Dere04g2339 923 PRINTS Disease resistance protein signature 194 209 - -
Dere04g2339 923 PRINTS Disease resistance protein signature 855 871 - -
Dere04g2339 923 Gene3D - 4 116 - -
Dere04g2339 923 FunFam Probable disease resistance protein At1g61300 154 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2339 Dere-ChrDere04 28307706 28313732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2339 167 421 WRKY Transcription Factor Family AT4G12020 26.641 4.18e-08 55.5