Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2312 ATGGAAGAATCAGGCGAATTGCAATCAGAAGAGAATAAAGTCTCGATGGAGAAAAATAAGAAGAGAAAACTCAAAACACCTGCCCAGGTTTTTGCTTTGGAGAAATTTTATAATGAGCACAAATACCCCACAGAGGAGATGAAATTAGAACTTGCTGAGGAGTTAGGGTTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACCGAAGGCTAAAAGATAAAAGATTGTCGAAAGATGAAGCTTGTGCTAATGGGCGACAAGATATTTCAAGTGGTGTCATCCAGGACCGTGGCAGTGGACTAGGGCAAGATTCATGTGGAAGCACCAAACATGGTGACTATAGGCATCTTGATCCCAAAGAGGTTGAGAGTCGTGGCCTTTATGGTCATGATGTTTTAGTTGCAGATATGACCTATGAGCGTAGGAATCATTATTCAGAAAATGTTAATGCAATGGATGACACATCATCTGAGACTAGCTTATCTTTGCAAGATCGGGATTCATATGATGCTGAGCATTCTGGGTATCTAACACCTAACGGAACTCTGCCATCTAAAATTCCCAAGGGTGCCATTAACATGAGATATAAACCATCAGGTTATCTTAAAGTGAAGGGAGAGGTAGAAAACCCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAGATATTATAGGGAAGATGGTCCACTACTTGGTATAGAATTTGATCCACTTCCTCCAGGGGCATTTGAGTGTCAAATTGCAGATCCAATTCATGAACCATACCATATTGCAAGTCCTGCTCTCCACAATTCTTCTGAAATTTCTGCTGTGAAAAGGCAACCCATTCTTAGCGCTAGGTATGATTCGTATAATACCAAATTTGGTTCCCAAGATTCCCATATGGAAGGAGCAGACCCCTCTGATTTCCAGGATAAGAAATCTCGCCAGCATTCAAAGCAAAGGCCACCTTTGCACAGTCATACCAATCCTTTGCCTTGCAGGAATTCTTCCCTGGATTTGTACGAGCATTCTGCTGAAGAAGCACCTGCATATAATAGCAATGAGAATCATAGAGTTGGCACTAAGTATCGTTTTGAAGGGATGAAATCTGATTCTGCTTCTAACCATAGTGATCACTGTGAAGGGAACCTAAATGACTCACTGCTGCAAGGCTATAATAATTTCAATTTGAAGAATGTGCATAGGAGTGAATATGTAAAATTTAAGCCGTCAAAATCAATCAGTAGTCCTTTTGTTTCTGTGGATACTGAAGATAGAGGAGGGCTATCTAGTAGGATGGTAAAGGAAAAGAAGTCTAGTGGAGATAGAAAGGCAAGAAAACAATATGATGATTCAGATGGAGTAAGGATGGTTTCATATGAAATCAGGGCTGCAAAACGTGTTGTTGATCTACCACTACAACACAATGTTAAACAAGATCCTGTTGCTCAGATGCAACCACTGAGAAGTCAGAGATCTGCCATGGATATGCCATCTAGCTTTAGCGAGGATGAAACTGCCAATACCAGCTCCTCTCTAGATGAAGCAGCTGGTTGCCGATAG 1545 0.4097 MEESGELQSEENKVSMEKNKKRKLKTPAQVFALEKFYNEHKYPTEEMKLELAEELGLTEKQISGWFCHRRLKDKRLSKDEACANGRQDISSGVIQDRGSGLGQDSCGSTKHGDYRHLDPKEVESRGLYGHDVLVADMTYERRNHYSENVNAMDDTSSETSLSLQDRDSYDAEHSGYLTPNGTLPSKIPKGAINMRYKPSGYLKVKGEVENPAITAVKKQLGRYYREDGPLLGIEFDPLPPGAFECQIADPIHEPYHIASPALHNSSEISAVKRQPILSARYDSYNTKFGSQDSHMEGADPSDFQDKKSRQHSKQRPPLHSHTNPLPCRNSSLDLYEHSAEEAPAYNSNENHRVGTKYRFEGMKSDSASNHSDHCEGNLNDSLLQGYNNFNLKNVHRSEYVKFKPSKSISSPFVSVDTEDRGGLSSRMVKEKKSSGDRKARKQYDDSDGVRMVSYEIRAAKRVVDLPLQHNVKQDPVAQMQPLRSQRSAMDMPSSFSEDETANTSSSLDEAAGCR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2312 514 MobiDBLite consensus disorder prediction 93 114 - -
Dere04g2312 514 MobiDBLite consensus disorder prediction 422 445 - -
Dere04g2312 514 MobiDBLite consensus disorder prediction 288 330 - -
Dere04g2312 514 Gene3D - 8 91 - -
Dere04g2312 514 SMART HOX_1 18 80 IPR001356 GO:0003677
Dere04g2312 514 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Dere04g2312 514 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 508 - -
Dere04g2312 514 SUPERFAMILY Homeodomain-like 18 85 IPR009057 -
Dere04g2312 514 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Dere04g2312 514 MobiDBLite consensus disorder prediction 470 514 - -
Dere04g2312 514 MobiDBLite consensus disorder prediction 7 23 - -
Dere04g2312 514 MobiDBLite consensus disorder prediction 473 514 - -
Dere04g2312 514 MobiDBLite consensus disorder prediction 408 445 - -
Dere04g2312 514 MobiDBLite consensus disorder prediction 1 23 - -
Dere04g2312 514 CDD homeodomain 20 75 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2312 Dere-ChrDere04 27689565 27695460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2312 3 508 Homeobox Transcription Factor Family AT4G03250 39.024 3.70e-84 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dere04g2312 Homeodomain 1.4e-16 CL0123