Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2297 ATGATGGATATGGGCTTGTTCCATCAAGGTGGCGTGGTTCAAAATGTGAGCATACAATTTGACAGGAAGCTGATCGGAGCAAGAATCTTTCACAAAGGCTATGAGATAAAATATGGCAAGGTAGACCCATCACCTCAAAATAGTGCACAAGACATCCTAGAGCATGGCACTCACACCCTATCAACTGTTGAAGGCAACTTCGTGCGAAACGTAGGTGTTCTTAACAATGGAAATGGCACGGCGAAGGGAGGATCTCCAAGAGCTCGTCTTGCAGTCTACAAAATGGGATATCCATTAGGGCCTTCCATGCAGTTACAAGGGGTATTCTTATTGTTTGCTCCGCAGGAAATGAAGGACCAGCACTTCAAACTGTGTGGAATTCAACTTTGCAACCCTGGAACACTTGATCCTAACAAGGTAAGGGGCAACATATTTATATGCCAACGAGGAAGGAGCGTGAGACCAGTTGACAAAGGCCAAGAAGCAAAGCGTGTAGGCGCAGTGCAAATGATTTTGGAAAATGATAACCAAATGGTGAATACAGCTACAGCTGATGCTCAAGTTGTAGATACATCCTGTGTTCCTAATTATCTCGACGTGACTGCGCCTGGTTTTAACATACTTTTTGCTTCTTCATCTGGTGCAAGTCCCTCCAACCTAGAGTCAGATTTATGTCGTTTCGATTATAATATAATATCAGGAACTTCTATGGCATGCCCTCATGTTGTTGGCAGTGTTGGTCTTATCAAAACTCGCCATCCCAAATGGAGTCCAGCTGCTATTAAGTCAGCAATCATGACCACAGCAACCACTAGAGATAACACCAATGGTCCAATTTTGGACGAAAATGATGATCGAGTAGCAACTCCATTTCATTATGGTTCTGGACATGTTAAACCTAACATTGCAATAGACCCTGGACTTGTTTATGATATGAAGAAATCTGATTACTTGAGCCTCTTATGTGCTTCTGGATACATTGACCAGGCAGTTTCAAACCATTTTAACTTGAAGCCATTCAAATGTCCAAGGGCATTCGGGCTAGAAGATTTCAACTACCCTTCAATCACACTGCCTAATCTGGGTGTGACACCTGTAAATGTTACTCGTACAGTAACAAATGTTGGGCCTCCAAGCACATATTTGTAA 1149 0.4282 MMDMGLFHQGGVVQNVSIQFDRKLIGARIFHKGYEIKYGKVDPSPQNSAQDILEHGTHTLSTVEGNFVRNVGVLNNGNGTAKGGSPRARLAVYKMGYPLGPSMQLQGVFLLFAPQEMKDQHFKLCGIQLCNPGTLDPNKVRGNIFICQRGRSVRPVDKGQEAKRVGAVQMILENDNQMVNTATADAQVVDTSCVPNYLDVTAPGFNILFASSSGASPSNLESDLCRFDYNIISGTSMACPHVVGSVGLIKTRHPKWSPAAIKSAIMTTATTRDNTNGPILDENDDRVATPFHYGSGHVKPNIAIDPGLVYDMKKSDYLSLLCASGYIDQAVSNHFNLKPFKCPRAFGLEDFNYPSITLPNLGVTPVNVTRTVTNVGPPSTYL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2297 382 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 96 IPR045051 -
Dere04g2297 382 PRINTS Subtilisin serine protease family (S8) signature 233 249 IPR015500 -
Dere04g2297 382 PRINTS Subtilisin serine protease family (S8) signature 51 64 IPR015500 -
Dere04g2297 382 ProSitePatterns Serine proteases, subtilase family, serine active site. 234 244 IPR023828 -
Dere04g2297 382 Gene3D - 321 382 - -
Dere04g2297 382 Gene3D Peptidase S8/S53 domain 199 317 IPR036852 GO:0004252|GO:0006508
Dere04g2297 382 Gene3D Peptidase S8/S53 domain 17 97 IPR036852 GO:0004252|GO:0006508
Dere04g2297 382 ProSiteProfiles Serine proteases, subtilase domain profile. 1 304 - -
Dere04g2297 382 Pfam Subtilase family 195 276 IPR000209 GO:0006508|GO:0008236
Dere04g2297 382 Gene3D - 113 191 - -
Dere04g2297 382 SUPERFAMILY Subtilisin-like 31 310 IPR036852 GO:0004252|GO:0006508
Dere04g2297 382 Pfam PA domain 136 186 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2297 Dere-ChrDere04 27477518 27480087 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2297 21 98 Subtilisin-like Serine Gene Family AT5G59810 51.282 3.92e-16 78.2