Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2294 ATGGTTGATTCCCATCATCCTCTAGCGTTATGCCGTACTCTCTGCATATTCTTCTGTGTTGCTTTGTTTGCATATGCTGCTGCCGAAGATAGCGAAGCAAATGCTCTGTTGAAGTGGAAGGCCAGCCTCAACAAAGAGAGCCAAGCTACCTTGTCTTCTTGGAAAAATGGCACCAAACCTTGCAGACAATGGAAAGGTATTTCTTGTGATCAGTCAATGTCTGTGTTCAATGTAAGTCTTTCAAATCTCAACCTACAAGGTACACTCTACAATCTCAACTTCGCTTCCTTCCCTAGCCTCCGCCATTTTGATATAAGTTACAACCTGTTTTACGGAAACATTCCCCACGAAATTGGTAACTTGTCCAGTCTTTTGACATTGAATATGTCTGAGAATCCTTCAATTAGAGGTCCCATCCCTAGAGAAATCGGGGCGTTAAGCACTCTGAATCGTCTTGATTTTAGTGCAAGTGGTCTCTCAGGGTCAATTCCCCAAGAAATTGGGAACTTGAGAAATCTGACGTATCTAGTGCTTGCTGCGAACTCCCTTTCTGGTCCCATTCCTCAAGAGATTGGAATGTTGAACAATCTTTTGCAACTTGATTTATCAGTAAACATGTTATCTGGTAGAATCCCATCTTCAATTGGAAACATGATCAAGTTACAAGAACTTTTTCTTGATACCAACAACCTCTCTGGTTCTATTCCTAATGAATTTGGGAAACTCTCTTCTCTTGTTAATATTCAATTGTCTGATAATAAACTCTATGGGCCAATCCCTCCCTCCATAGGAAATTGTACAAAGCTCGAGCAATGGAGCATGAGTGGTAACAGACTTTCTGGTCCAATTCCTCCTTCCATTGGTAACTTGATCAATTTATGGGACTTCCAACTTGATAATAACAATCTTTCTGGACCTATTCCTTCCACCATAGGAAATTTGACAAAACTCGCCCAAGTATTATTGATGTGGAACAATCTCAGTGGTCACATTCCTCTGGAAATGAATAACTTGACAAGTTTGTATAACTTACAACTAAGTTATAATAATTTCATTGGCCATTTGCCCCAAGAGATTTGTCGTGGAGGGACATTATACAGATTCAGTGCTCGTGCTAACCATTTTACTGGTCCAATTCCAACAAGTTTGAAGAATTGCTCTAGCCTTTCTAGACTCATGCTTGATCATAACCAATTAGTTGATAATATAACAGATGCTTTTGGAGTATATCCAAATCTGAACTTCACCGATCTAAGTGGCAATAAATTGTATGGCCATCTTTCATCCACGTGGGGAAAGTGTCCCATTCTTAGAAGTCTCACCATTTCCGACAATAATCTTTCTGGCGGTATACCACCAGAAGTAGGTGAGGCAACCAATCTTGTTGAACTTGATCTCTCTTCAAATCATCTAACAGGACAAATTCCAAAAGACCTGGGGAAGTTGGCCTTATTGGAAAAACTCTCTTTGAGCAACAATATACTCTCAGGCAAGGTTCCCACAGAAATTGGATCATTGAATCAACTTAAAAAATTGGAGCTAGCAGCCAATAATTTTAGTGGCTCAATCAAAAAGCTTGTGGGACTAAAAGGGTTGCAGTTTTTGAATTTGAGCAGAAACAAGTTTGAGGAAAGCATTCCCTCTGAGTTAGGCAAACTCCAAGCTCTTGAACAACTTGATCTTAGTGAGAATTTGTTGAGTGGAGCAATACCATCAACGCTTGGAGCGTTGCAAAATCTGCAAATACTGAACCTCTCACATAATAATTTCTCTGGCACCATTTTTTCCAGCTTTGGTGGGTTGTCATCCTTGTTTTCTGTGGATATATCATACAACCAATTAGAGGGCTCCCTTCCAAACATTCCAGTCTTTCGTAACATAACATTTCAAGCACTGCGGAATAATAAAAATTTGTGCGGTGATGTCATCGGTTTACATCTTTGTAGTAGTTTTGAAAATAATGCAAGTGGTCATAAGAGCAAAAAAGTCAAGTTCTTGATAATATTCCTCCCATTGGCCATACTGATTCTTATAGTTGTTGGAGCTTCTTACTTTTTTTGGCAAAGTGCAAGAAAGAAAGATCACCAAGATAAAGAAGCAAATTCCCAAGATCTTTATGTTGTATGGAGTTCTGGAAGAGAAATAATGTATGAAGATATAATTGAAGCTACAAAGGACTTCGATGACAGATACCTCATTGGAAAGGGGGGCCAGGGAAGTGTTTATAAGGCTGAGTTGCCCAGTGGTCACGTTTTTGCTGTGAAGAAACTTTATTCAATGCCAAGTGGTGAAATCTCCAATCTCAAAGCTTTTACAAGTGAGGTTCGAGCTTTGACAGAAATCAAACATCGTAACATTGTGAAGCTATATGGGTTTTGTTCAAATCCACAATTCTCATTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGGATAACATACTTAAGCATGAGAAGAAAGCCACTGAGCTTGATTGGAATAGGAGGGTTAACCTTGTTAAAGATGTGGCTAATGCTTTATCCTATATGCATCATGATTGCTCGTGCCCTATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCAGATTATGAAGAGGCTCGCGTTGCTGATTTTGGAACAGCTAAGTTTCTGAAGCCTAATTCAGACAATATGACCTCATTTGCAGGCACCTTTGGGTATGCTGCTCCAGAGATTGCTTACATTATGGAGGCAAACGAGAAATGTGATGTTTACAGTTTTGGAGTATTGACTTTGGAAATCATAATGGGAATGCATCCAGGAGAGTTTATTTCATCTTTAATGGAGAAGTCAACTTCCTATGATTTGCCACTGAAGGATGTGTTAGACCAACGACTTCCTCTACCCACGAAACCAATCGTTGAGGAGGTGATCTTGGTTGCAAAACTAGCATTTTCTTGCTTGAATGAAAGCCCACAATCTCGTCTAACCATGGAACAAGTATCTATGGAGCTAGCAAGGGGAAAAACACATTTAGTGGATCAGTTTGTCGCCCTCACAATTCGACAACTCATGAAGGATCAAACTCCTTAA 3063 0.3963 MVDSHHPLALCRTLCIFFCVALFAYAAAEDSEANALLKWKASLNKESQATLSSWKNGTKPCRQWKGISCDQSMSVFNVSLSNLNLQGTLYNLNFASFPSLRHFDISYNLFYGNIPHEIGNLSSLLTLNMSENPSIRGPIPREIGALSTLNRLDFSASGLSGSIPQEIGNLRNLTYLVLAANSLSGPIPQEIGMLNNLLQLDLSVNMLSGRIPSSIGNMIKLQELFLDTNNLSGSIPNEFGKLSSLVNIQLSDNKLYGPIPPSIGNCTKLEQWSMSGNRLSGPIPPSIGNLINLWDFQLDNNNLSGPIPSTIGNLTKLAQVLLMWNNLSGHIPLEMNNLTSLYNLQLSYNNFIGHLPQEICRGGTLYRFSARANHFTGPIPTSLKNCSSLSRLMLDHNQLVDNITDAFGVYPNLNFTDLSGNKLYGHLSSTWGKCPILRSLTISDNNLSGGIPPEVGEATNLVELDLSSNHLTGQIPKDLGKLALLEKLSLSNNILSGKVPTEIGSLNQLKKLELAANNFSGSIKKLVGLKGLQFLNLSRNKFEESIPSELGKLQALEQLDLSENLLSGAIPSTLGALQNLQILNLSHNNFSGTIFSSFGGLSSLFSVDISYNQLEGSLPNIPVFRNITFQALRNNKNLCGDVIGLHLCSSFENNASGHKSKKVKFLIIFLPLAILILIVVGASYFFWQSARKKDHQDKEANSQDLYVVWSSGREIMYEDIIEATKDFDDRYLIGKGGQGSVYKAELPSGHVFAVKKLYSMPSGEISNLKAFTSEVRALTEIKHRNIVKLYGFCSNPQFSFLVYEFLEGGSLDNILKHEKKATELDWNRRVNLVKDVANALSYMHHDCSCPIVHRDISSKNVLLSSDYEEARVADFGTAKFLKPNSDNMTSFAGTFGYAAPEIAYIMEANEKCDVYSFGVLTLEIIMGMHPGEFISSLMEKSTSYDLPLKDVLDQRLPLPTKPIVEEVILVAKLAFSCLNESPQSRLTMEQVSMELARGKTHLVDQFVALTIRQLMKDQTP 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2294 1020 Gene3D Ribonuclease Inhibitor 186 285 IPR032675 -
Dere04g2294 1020 FunFam MDIS1-interacting receptor like kinase 2 806 1001 - -
Dere04g2294 1020 Gene3D Transferase(Phosphotransferase) domain 1 806 1009 - -
Dere04g2294 1020 SUPERFAMILY L domain-like 57 309 - -
Dere04g2294 1020 FunFam Nuclear pore complex protein NUP107 29 187 - -
Dere04g2294 1020 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Dere04g2294 1020 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 188 285 - -
Dere04g2294 1020 SUPERFAMILY RNI-like 297 654 - -
Dere04g2294 1020 PANTHER LEUCINE RICH REPEAT KINASE 2 257 999 - -
Dere04g2294 1020 Gene3D Ribonuclease Inhibitor 291 359 IPR032675 -
Dere04g2294 1020 Gene3D Phosphorylase Kinase; domain 1 687 805 - -
Dere04g2294 1020 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 340 652 - -
Dere04g2294 1020 Pfam Leucine rich repeat 555 614 IPR001611 GO:0005515
Dere04g2294 1020 Pfam Protein kinase domain 731 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2294 1020 SMART LRR_typ_2 529 552 IPR003591 -
Dere04g2294 1020 SMART LRR_typ_2 553 576 IPR003591 -
Dere04g2294 1020 SMART LRR_typ_2 97 121 IPR003591 -
Dere04g2294 1020 SMART LRR_typ_2 170 194 IPR003591 -
Dere04g2294 1020 SMART LRR_typ_2 338 362 IPR003591 -
Dere04g2294 1020 SMART LRR_typ_2 218 241 IPR003591 -
Dere04g2294 1020 SMART LRR_typ_2 577 600 IPR003591 -
Dere04g2294 1020 SMART LRR_typ_2 242 266 IPR003591 -
Dere04g2294 1020 SMART LRR_typ_2 459 482 IPR003591 -
Dere04g2294 1020 ProSitePatterns Tyrosine protein kinases specific active-site signature. 851 863 IPR008266 GO:0004672|GO:0006468
Dere04g2294 1020 FunFam Leucine-rich repeat receptor protein kinase MSP1 690 805 - -
Dere04g2294 1020 ProSiteProfiles Protein kinase domain profile. 727 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2294 1020 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Dere04g2294 1020 Pfam Leucine Rich Repeat 460 482 IPR001611 GO:0005515
Dere04g2294 1020 SUPERFAMILY Protein kinase-like (PK-like) 702 993 IPR011009 -
Dere04g2294 1020 Gene3D Ribonuclease Inhibitor 360 656 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2294 Dere-ChrDere04 27423817 27427005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2294 1 900 Receptor kinase-like Gene Family AT4G08850 43.723 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere04g2294 Pkinase 2.1e-44 CL0016