Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2293 ATGCATGAGGAAAAAGCCATTGAGCTTGATTGGAAGAAGACGGTGAACATTGTTAAAGATGTGTCTAATGCTTTAACCTATATGCATCATGGTTACTCATGCCCTATTGTTCATCGTGACATATCAAGAAAGAATGTTCTTTTGAGTTTAGCTTATGAAGAAGCTCGCATCATTAAATTTGGAACAACTAAGTTTTTAAAGCCTAACTCCAATAATATGACATCATTTGTATGCACCTTTGGGTATGATGCTCCAGAGATTGCTCACATTATGGAAGTGAACGAGAAGTGCAATGTTTACAATTTTGGAGTATTAACTTTGGAAATCATAATAGGAATGCATCTAGGAGAATTTACTTCATCTTTGATGGAGAAATCAACTTCTTATGATTTGCCATTGAAGGATGTGTTAGACCCACGACTTCCTCATCCCACAAAACCAATCATTGAGGATGTGATCTTGCTTGTAAAATTAACATTTTCTTGCTTGAATGAAAGTCCAGTGTCTTGTCCAACTATGGAACAAGTATGTCACACCTCATAA 543 0.3591 MHEEKAIELDWKKTVNIVKDVSNALTYMHHGYSCPIVHRDISRKNVLLSLAYEEARIIKFGTTKFLKPNSNNMTSFVCTFGYDAPEIAHIMEVNEKCNVYNFGVLTLEIIIGMHLGEFTSSLMEKSTSYDLPLKDVLDPRLPHPTKPIIEDVILLVKLTFSCLNESPVSCPTMEQVCHTS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2293 180 PANTHER LEUCINE RICH REPEAT KINASE 2 3 178 - -
Dere04g2293 180 Pfam Protein kinase domain 9 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2293 180 SUPERFAMILY Protein kinase-like (PK-like) 5 178 IPR011009 -
Dere04g2293 180 Gene3D Transferase(Phosphotransferase) domain 1 1 180 - -
Dere04g2293 180 ProSitePatterns Tyrosine protein kinases specific active-site signature. 36 48 IPR008266 GO:0004672|GO:0006468
Dere04g2293 180 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2293 Dere-ChrDere04 27396657 27397321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2293 1 178 Receptor kinase-like Gene Family AT5G65700 35.106 3.25e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere04g2293 Pkinase 3.8e-18 CL0016