Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2288 ATGCCACCAGACAGGCAAGCACGGTCTCGTTCTGCATCAATTTGCTATTCTTTTCTTCAAGTTTCACTCACAGTCTGGTTTTCCATTCTCTGTTTGCAGCCTTACATTGTATACTTGGGATCCCATTCTCATGGCTCACACCCCTCCTCTGCTGATATGGACTCTGCCACAAACTCCCATTATGACTTGCTGGGCTCTGTCCTCGCAAGCCATGAGAGGGCCAAAGAAGCAATCTTTTATTCTTACAACAAACACATTAATGGCTTTGCTGCACTACTTGAAGAGGAAGAAGCAGCAGCGATCAAAAAAAATGCAAATGTGGTGTCGGTGTTCCTGAGCAAAACTTATGCTCTGCACACCACCAGGTCATGGGGATTTCTGGGACAAGAGAGAAATGGAAGAGTGAGACCAGACTCCGCTTGGGTAAAAGGACGATTTGGCCAGAATGTAATAATCGGCAACATAGATACCGGTGTTTGGCCTGAATCCAAGAGTTTTCGAGACGATGGATACGGGCCTATTCCATCAAGGTGGCGTGGTTCAAAATGTGAGCTGTACAATTTGACTGGTCAACGCACTCTCACTCTTTGCAACAGGAAGTTGATTGGAGCGAGAATCTTTCACAAAGGTTATGAGATAAAATATGGGAATATTGACCCCATACATCAAAACAGTGCACGCGACATCTATGGGCACGGTAGTCATACTCTGTCAACTGCTGGGGGCAACTTCGTGCGAGACGTTAGCGTTTTGAACAACGGCAATGGCACTGCGAAGGGAGGATCCCCAAGGGCTCGTCTTGCAGTCTACAAAGCTTGCTGGGCTCTGGATGGAGGAGGCTGCACTGAAGAGGATTTACTTTCTGCTTTCGACCAAGCCATTGATGATGGTGTCGATATTCTCTCTGTTTCACTTGGTGGGATGGCTGTGCCAGACATTGATGAGATGTTAACAAATGGGATTTCCATTGGGGCCTTCCATGCAGTTACAAGGGATATACTGGTTGTTTGCTCTGGGGGTAATAATGGACCAGCTCTTCAAACTGTGTCGAATGTGGCACCTTGGGTGTTCACTGTTGGTTCTGGCTCAATAGATAGGGACTTCAATGATAATATTACTCTTGGTAATGGCCAACGTATAAAGGGGACCAGTCTTGCAGCAAACTCGACATCTCGACAATTTTTACCCGTTGTTATAGCTGGTAACGCTAGGCTTCCTAATGCGTCATTTCAAGCTGCTCAACTTTGCAATCCTGGAACACTTGATCCTAACAAGGTAAGGGGTAGCATATTGATATGCCAGCGAGGAAGGAGCCTAAGACCAGTTGGAAAAGGCCAAGAAGCAAAGCGTGCAGGCGCAATACAAATGATTTTGCAAAATGATAACCAAATGGGGAATACGGCAACAGCTGATGCTCAAGTTGTTGATACATCTTGTGTTCCTAATCATACTCCTAAAAATAGCACCCCTACAGAAAGCGAAAACTACTTATACAATAGCAAGAACCCTCTTGCATTCTTGGATAATGCAAAAACCTTTATAGGAATAAGGCCAGCTCCAAAAGTTTCTTCATTTTCATCAAGGGGACCCAATCTAGTTTTGCCGTCGATCCTCAAGCCTGATGTGATTGCACCTGGTCTCCAAATACTCGCTGCTTATTCATCTGGTACAAGTCCCACCAACCTAGAATCGGATTTACGTCGTTTTGATTATAACATAATATCAGGAACTTCTCAAGCATGCCCTCATGTTGCTGGCATTGCTGGTCTTATCAAAACACGCCATCCTAAATGGAGTCCAGCAGCCATCAAATCAGCAATCATGACCACAGCAACCACCCGTGATAACACCAATGGACCAATTTTAGACGAAAAAGATGATCGAGTAGCAACTCCATTTCATTATGGTTCCGGACATGTTAAACCTAACCTTGCAATAGACCCTGGACTTGTTTATGATCTGAAGAAATCTGATTACTTGAACCTCTTATGTGCTTCTGGATACAATGATCGAGCAGTATCTAACCATTTTAATGCTAAGCCATTCAAATGTCCAAGGTCTTTCAGGCTAGAAGATTTCAACTACCCTTCAATCACATTGCCTTATCTGGGTGTAAAGCCTATAAATGTTACTCGTACAGTAACAAATGTTGGGCCTCCACGCACATATTTTGCAAATTTCCAAGCCCCAAGAGGAGTTAAACTCACCGTTCTGCCTAATACTATAACTTTTCAGAGAACAAATGAAAAAAAGACCTATCGAGTTATTTTGCAGGCAACAGGTTCAGCTCAAAATTTAAAATCTTCATTTGGGGAGTTAACATGGACCGATGGCAAGCACAGAGTAAGGAGTCCTATTGTAATTGTGCAATTTGAGAAATCACCTTGA 2388 0.438 MPPDRQARSRSASICYSFLQVSLTVWFSILCLQPYIVYLGSHSHGSHPSSADMDSATNSHYDLLGSVLASHERAKEAIFYSYNKHINGFAALLEEEEAAAIKKNANVVSVFLSKTYALHTTRSWGFLGQERNGRVRPDSAWVKGRFGQNVIIGNIDTGVWPESKSFRDDGYGPIPSRWRGSKCELYNLTGQRTLTLCNRKLIGARIFHKGYEIKYGNIDPIHQNSARDIYGHGSHTLSTAGGNFVRDVSVLNNGNGTAKGGSPRARLAVYKACWALDGGGCTEEDLLSAFDQAIDDGVDILSVSLGGMAVPDIDEMLTNGISIGAFHAVTRDILVVCSGGNNGPALQTVSNVAPWVFTVGSGSIDRDFNDNITLGNGQRIKGTSLAANSTSRQFLPVVIAGNARLPNASFQAAQLCNPGTLDPNKVRGSILICQRGRSLRPVGKGQEAKRAGAIQMILQNDNQMGNTATADAQVVDTSCVPNHTPKNSTPTESENYLYNSKNPLAFLDNAKTFIGIRPAPKVSSFSSRGPNLVLPSILKPDVIAPGLQILAAYSSGTSPTNLESDLRRFDYNIISGTSQACPHVAGIAGLIKTRHPKWSPAAIKSAIMTTATTRDNTNGPILDEKDDRVATPFHYGSGHVKPNLAIDPGLVYDLKKSDYLNLLCASGYNDRAVSNHFNAKPFKCPRSFRLEDFNYPSITLPYLGVKPINVTRTVTNVGPPRTYFANFQAPRGVKLTVLPNTITFQRTNEKKTYRVILQATGSAQNLKSSFGELTWTDGKHRVRSPIVIVQFEKSP 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2288 795 PRINTS Subtilisin serine protease family (S8) signature 575 591 IPR015500 -
Dere04g2288 795 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Dere04g2288 795 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Dere04g2288 795 Gene3D Peptidase S8/S53 domain 149 659 IPR036852 GO:0004252|GO:0006508
Dere04g2288 795 ProSiteProfiles Serine proteases, subtilase domain profile. 123 646 - -
Dere04g2288 795 Pfam Subtilase family 147 618 IPR000209 GO:0006508|GO:0008236
Dere04g2288 795 FunFam Subtilisin-like protease SBT1.5 149 374 - -
Dere04g2288 795 CDD Peptidases_S8_3 116 612 IPR034197 -
Dere04g2288 795 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 119 IPR037045 -
Dere04g2288 795 FunFam Subtilisin-like protease SBT5.3 32 119 - -
Dere04g2288 795 Pfam PA domain 408 471 IPR003137 -
Dere04g2288 795 Pfam Fibronectin type-III domain 692 788 IPR041469 -
Dere04g2288 795 SUPERFAMILY Subtilisin-like 118 650 IPR036852 GO:0004252|GO:0006508
Dere04g2288 795 Gene3D - 663 790 - -
Dere04g2288 795 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 787 IPR045051 -
Dere04g2288 795 ProSitePatterns Serine proteases, subtilase family, serine active site. 576 586 IPR023828 -
Dere04g2288 795 Pfam Peptidase inhibitor I9 35 119 IPR010259 -
Dere04g2288 795 CDD PA_subtilisin_like 371 507 - -
Dere04g2288 795 Gene3D - 365 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2288 Dere-ChrDere04 27177797 27182715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2288 35 788 Subtilisin-like Serine Gene Family AT2G04160 50.528 0.0 738