Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2285 ATGTCTGAAAGGGATTCCACTAAGCTGTTATCAGTTTGGCTGATTCTCAGCGTACTGCTCTGCGTCTGTGTGAAGCTTTCTTCATCCCAAGTAGCTTCAGGAGATCACAGCGAAGCAAGTGCTCTGTTGAAGTGGAAAGCCAGCCTTGACAAGCAAAGCCAAGCTACCTTGTCTTCTTGGAAGAATGGCACTAGTCCTTGCAGAAACTGGAAAGGGATTTCATGTGATGAATCCATGGCAGTCTCAGTAGTTAACCTCACCAGTATTGGGCTTCAAGGTAAGCTTCAGACTCTCAGCTTCTCATCCTTCCCTAACCTCACCCATTTTGACATCAGTAACAACCTGTTCTATGGAATCATTCCCACTCAGATAGCTAATCTCTCTAGTATTCTGACATTGAACATGGCTGGTAATCCTCTAACTGGTCCTATACCTCGTGAAATAGGAGCCTTGAGCACTCTAAAGCACCTTGACATTGGAGTATGTAATCTCTCTGGGTCAATTCCCCAAGAGATTGGGAATTTGAGGAATTTGATAGATCTAACACTTGAAACTAATCACCTTTCTGGCTTCATTCCTCAAGAAATTGGAATGCTGAGTAATCTTGTGCAGCTTGATCTGTCAGAAAATGCTCCTCTAACTGGTAGAATTCCTTCTACAATTGGAAACTTGAGCAAGTTAGCACTACTTTACCTTTACAACAGCAGTCTCATTGGTCCCATTCCTGATGAACTTGGGAAACTCTATTCCTTGAGTACAGCTCAGTTGGATGGTAATAACCTGTTTGGTCCAATTCCTCCCTCCATAGGAAACTTGACGAAGCTTGAAGACTTGAAGCTGTCAAAAAACAAACTTTCTGGACCAATTCCTGCTTCTATTGGAAACCTGGTCAATTTGAAGCAGCTTGGCCTTTTTCAAAACAGTCTTTCTGGTACTATTCCTTCCACCATAGGCAATTTGACAAAGCTCACTGTATTGCAATTGCTAACCAACAAACTTAGTGGTAGCCTTCCACCCCAATTGGATAACCTTACCAACTTGGAAAATTTACAGCTAGGTGAAAATGATTTCACTGGTCATTTGCCTCACCATGTTTGCCTTGGTGGATCACTAGAAAGGCTCAGTGCTTCCCCAGATAACCGTTTTACTGGCCCGATTCCAAGAACTCTGAGAAATTGCACTAGCTTGATTAGACTCAGGCTTGATGGTAACCAATTAGTTGGAAATATATCAGAGGATTTTGGTGTTTACCCAAATTTGAAATACATTGATCTGAGTGGCAATTTGTTGTATGGTCAGCTTTCACCTAAATGGGGTAAGTGTGGTAATCTTGCAAGCCTCAAGATTTCTAACAACAATATTACAGGTGGCATACCCCCGGAACTAGGAGAGGCAATCAATCTTGGTGAACTTGACCTCTCTTGGAATCATTTGAAAGGGCAAATTCCAAAAGAACTAGGGAAGTTGACATCAATGAATACACTGTATTTAAGCCACAATCAATTTTCAGGCAAGGTTCCGAGAGAAATTGGATCATTAAATCAACTTGAAATATTGGACTTGGCAGCAAATAATTTCAGTGGCTCAATCATGAAAGTGCTTGGGGGATTAGAAAAGTTAAGGATATTGAATTGGAGCAAAAACACATTTGGGGAAAGCATTCCTTCTGAACTTGGCAAACTTCAAGCTCTTGAAAGGCTTGATCTTAGTGAGAATTTGTTGAGTGGAACAATACCAACAGAACTTGGAGACTTGGCAAGATTAGTAATATTGAATCTCTCACATAATCATCTTTTTGGCTCTATTCCATCCAGATTTGATCAGATGGAAGCTTTGACTTATGTTGATATATCATCCAACCAATTAGAGGGCTCCCTGCCAAACAATCCAGCCTTTCTTAATCTGACACATGAAGCATTGAGGAATAATAAAGGCTTATGTGGTAATGTTAGTGGCTTAGATCCTTGTAATAGATTCAGTGAGAATCAAAATGGCTTTAAGAGCAAAAAAGTCAAGTTTTTTATATCATTTCTCACTTTGGGCACGCTAATAATGGTAGTGGCTGGAGTTTCATACGCCTTTTATAGAAGCTCAAGAAAAACAAAAATGGAGGATGAAGAAGCAAAAACTCAACACTTATACTTTGTATGGAGTTCTGATAGGGAAATAATGTACAAAAATATCATTGAAGCCACAAAGTATTTTGATGACAGATATCTCATTGGCAAGGGAGGTCAAGGAAGTGTGTATAAGGCAGAGTTGCCTACAGGTCAAGTTGTTGCTGTGAAGAAGCTTCATTCAATGCCAAATGGAGAAATCTCCAACCGAAAAGCATTAACAAGCGAAGTTCAAGCCTTGACAGAAATCAAACATCGTAACGTTGTGAAGCTATATGGGTTTCTTGCAAATTCAGAATTCTCTATTCTGGTTTATGAGTTCATGGAAGGTGGTAGCTTGGATAACGTATTGAAAAATGGGAAACAAGCCATTGAACTTGATTGGAACAAGAGGGTGAATATTGTAAAAGGGGTGGCTAATGCTTTATTCTATATGCATCATGGATGCTCAATTCCTATAGTTCATCGCGACATATCAAGTAAAAATATTCTTCTAGATTTAGAACATCAAGAAGCTCGTCTCACTGACTTCGGAACAGCTAAGTTTCTGAAACCAAACTCAGAAAACATGACCACATTTGCAGGAACCTTTGGGTATGCTGCTCCAGAGATTGCTTACATTATGGAAGCGAATGAGAAATGTGATGTCTACAGCTTTGGAGTACTGACTTTGGAAATCATTATGGGAATGCATCCAGGAGAGCTTATTGCTTCTCTGAGAGAGACACTAACAACCTATGATTTGCCAGTGAAGGATTTGTTGGACCAAAGGCTTCCTCAACCCAAGATATCAATTATTAAGGAAGTGATGCTGATTGCAAAAATTGCATTTGCTTGCTTAAATGAAAATCCACGATTTCGTCCAACCATGGAACAAGTATCTATGGAGCTTGTGACGCCAAAATTCCCTTTAGTAAATCAGTTCGCAACAGTCACAATCAGACAACTCATGAGAGACTGA 3078 0.3996 MSERDSTKLLSVWLILSVLLCVCVKLSSSQVASGDHSEASALLKWKASLDKQSQATLSSWKNGTSPCRNWKGISCDESMAVSVVNLTSIGLQGKLQTLSFSSFPNLTHFDISNNLFYGIIPTQIANLSSILTLNMAGNPLTGPIPREIGALSTLKHLDIGVCNLSGSIPQEIGNLRNLIDLTLETNHLSGFIPQEIGMLSNLVQLDLSENAPLTGRIPSTIGNLSKLALLYLYNSSLIGPIPDELGKLYSLSTAQLDGNNLFGPIPPSIGNLTKLEDLKLSKNKLSGPIPASIGNLVNLKQLGLFQNSLSGTIPSTIGNLTKLTVLQLLTNKLSGSLPPQLDNLTNLENLQLGENDFTGHLPHHVCLGGSLERLSASPDNRFTGPIPRTLRNCTSLIRLRLDGNQLVGNISEDFGVYPNLKYIDLSGNLLYGQLSPKWGKCGNLASLKISNNNITGGIPPELGEAINLGELDLSWNHLKGQIPKELGKLTSMNTLYLSHNQFSGKVPREIGSLNQLEILDLAANNFSGSIMKVLGGLEKLRILNWSKNTFGESIPSELGKLQALERLDLSENLLSGTIPTELGDLARLVILNLSHNHLFGSIPSRFDQMEALTYVDISSNQLEGSLPNNPAFLNLTHEALRNNKGLCGNVSGLDPCNRFSENQNGFKSKKVKFFISFLTLGTLIMVVAGVSYAFYRSSRKTKMEDEEAKTQHLYFVWSSDREIMYKNIIEATKYFDDRYLIGKGGQGSVYKAELPTGQVVAVKKLHSMPNGEISNRKALTSEVQALTEIKHRNVVKLYGFLANSEFSILVYEFMEGGSLDNVLKNGKQAIELDWNKRVNIVKGVANALFYMHHGCSIPIVHRDISSKNILLDLEHQEARLTDFGTAKFLKPNSENMTTFAGTFGYAAPEIAYIMEANEKCDVYSFGVLTLEIIMGMHPGELIASLRETLTTYDLPVKDLLDQRLPQPKISIIKEVMLIAKIAFACLNENPRFRPTMEQVSMELVTPKFPLVNQFATVTIRQLMRD 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2285 1025 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 250 1004 - -
Dere04g2285 1025 Gene3D Ribonuclease Inhibitor 194 258 IPR032675 -
Dere04g2285 1025 FunFam Nuclear pore complex protein NUP107 35 194 - -
Dere04g2285 1025 Gene3D Phosphorylase Kinase; domain 1 695 813 - -
Dere04g2285 1025 ProSiteProfiles Protein kinase domain profile. 735 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2285 1025 Pfam Leucine rich repeat 539 598 IPR001611 GO:0005515
Dere04g2285 1025 SMART LRR_typ_2 585 608 IPR003591 -
Dere04g2285 1025 SMART LRR_typ_2 344 368 IPR003591 -
Dere04g2285 1025 SMART LRR_typ_2 489 513 IPR003591 -
Dere04g2285 1025 SMART LRR_typ_2 175 199 IPR003591 -
Dere04g2285 1025 SMART LRR_typ_2 272 296 IPR003591 -
Dere04g2285 1025 SMART LRR_typ_2 561 584 IPR003591 -
Dere04g2285 1025 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 345 660 - -
Dere04g2285 1025 Gene3D Transferase(Phosphotransferase) domain 1 814 1008 - -
Dere04g2285 1025 ProSitePatterns Tyrosine protein kinases specific active-site signature. 859 871 IPR008266 GO:0004672|GO:0006468
Dere04g2285 1025 FunFam MDIS1-interacting receptor like kinase 2 814 1008 - -
Dere04g2285 1025 SUPERFAMILY Protein kinase-like (PK-like) 711 1002 IPR011009 -
Dere04g2285 1025 SUPERFAMILY L domain-like 54 375 - -
Dere04g2285 1025 Pfam Leucine Rich Repeat 154 175 IPR001611 GO:0005515
Dere04g2285 1025 Gene3D Ribonuclease Inhibitor 35 193 IPR032675 -
Dere04g2285 1025 Gene3D Ribonuclease Inhibitor 259 366 IPR032675 -
Dere04g2285 1025 FunFam Leucine-rich repeat receptor protein kinase MSP1 698 813 - -
Dere04g2285 1025 Gene3D Ribonuclease Inhibitor 367 658 IPR032675 -
Dere04g2285 1025 Pfam Protein kinase domain 739 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2285 1025 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 239 339 - -
Dere04g2285 1025 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Dere04g2285 1025 SUPERFAMILY RNI-like 256 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2285 Dere-ChrDere04 27061896 27065059 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2285 16 908 Receptor kinase-like Gene Family AT4G08850 43.750 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere04g2285 Pkinase 9.9e-46 CL0016