Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2273 ATGCCTCAATCTTCTGTCTTTCCACTGTTGACTATATATGGAAATATAGTATTTACGAATTGTGCAAAGTTTCTCGATTGTGTCAAGTATGCTAAGACTATGGGAATCAAACCTTCCAAAGCTATGTTCCTGATAGTAATTAGTGTTTTGTCACAATCGAAGAAATCAACCTGGGATTTGAAATTGGATATCTTCGAGAGGTGTGGCTGGTCCAAGGATCTCACTCTTTTAGCATTTAGTAAATTTCCATATTGCATGCTTCTTTCAGAAGAGAATATCAGAAACTCAGTAAAGTTTCTTGTGGACGAAATGGGTTTGCCGTTGGAAAATATAGCTGGATGCCCAACAATTCTTGGCTATAGCTTGAAGCAGAGGATTATTCCTAGATGGTATTATGACACATGCAGGAAGGCTTCAGCATCACTTGTGCTTCTACATTTAGAATGA 447 0.3781 MPQSSVFPLLTIYGNIVFTNCAKFLDCVKYAKTMGIKPSKAMFLIVISVLSQSKKSTWDLKLDIFERCGWSKDLTLLAFSKFPYCMLLSEENIRNSVKFLVDEMGLPLENIAGCPTILGYSLKQRIIPRWYYDTCRKASASLVLLHLE 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2273 148 PANTHER CGI-12 PROTEIN-RELATED 9 132 IPR003690 GO:0003690|GO:0006355
Dere04g2273 148 Pfam mTERF 49 131 IPR003690 GO:0003690|GO:0006355
Dere04g2273 148 Gene3D Transcription termination factor 3, mitochondrial 1 141 IPR038538 -
Dere04g2273 148 SMART mt_12 40 71 IPR003690 GO:0003690|GO:0006355
Dere04g2273 148 SMART mt_12 108 141 IPR003690 GO:0003690|GO:0006355
Dere04g2273 148 SMART mt_12 76 107 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2273 Dere-ChrDere04 26767255 26768533 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere04g2273 mTERF 3.8e-15 No_clan