Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2272 ATGGATGTGGTCGTGGAACTCCCCTATTGCTATCTTCTTCTGTTATCTCTAATAGGAATACAGAGAGAGAGTTTCAAAACAGAATTCGACGGATGTCCTGCGAGCGGGGGTAATTGGAGCTGGCAAACCGATGTGGGTGAGTTTCACATAACCATTCAATCAATCATGCTTACTTTTTTCATAGCAAGATTATCTTCATCACTGCCCTGCAGGAGGAGGACCCTGATTGGTTCCCTCCATCACAATGCTTCCCACATTTTCAGTTCGTTTTCTTCACTTTTGGAATTGTCTGAATCGAATCAACCAAAACAAAAACTAGAAGAAAGTGAATCGTTTACTGTCTCGTATCTCATGAACTCATTAGGCTTGTCCCCTAAAGTTGCTATTCAAGTATCGAAAAGGGTTAAACTGAAAGACCCTGATAAACCCAACTCGATACTTAATCTTTTAAGGAGCTACGGATTCTTAGATACCCAGATATCCAAAATTGTGAACACGTATCCAAGAGTTCTCTTGGCAAAGCCCGAGAAGACCCTTTTGCCCAAGCTATGGTTTTTCCAGTCTATAGGGTTTTCCTGTTCTGAACTACGAGAACTCCTTGTATCTGACTCAAGACTTCTAAGTAGGAGCTTAACGAAAACCATAATTCCCCGTTATGAGGCCCTTAAGAGTGTACTTGATGACGATGAGAAAGTAAATATAGCTTTAAAACGCTCAGGCTGGATTTATCTCCACCACGATGATGTAACGAACGTAGTTCAAAACATAAAGGTTTTGAGAGATCATGGAATGCCTCAATCTTCTGTCTTGCCACTGTTGACTAGATATGCACGTGCAGCATTTATGAATCATGCACAGTTTCTCGAATATGTCAAGTTTGCCAAGGAAACAGGAATCGAACCCTCCAAGGCTACGTTCATTACAGCAGTTAATGTTTTATCCCAATTGAGGAAATCAACCTGGGAGTTGAAATTGAATATCTTCCAGAGGTGTGGCTGGTCCAGGGATCTCACTCTTTTAGCATTCAGTAAATTTCCATACTGCATGCTTCTCTCAGAAGAAAATATCAGAAACTCAATGAAGTTTCTTGCGGATGAAATGGGTTTGCCGTTGGAAGATATAGCTAGATGCCCAACAATTCTTAGCTATAGCTTGAAGCAGAGGATTATTCCTAGATGGTCAGTAGTTAAAATTTTGAAAAGGAAGGGTTTGATCAAGAATGAGCAGTCCTTACGTTCCATTATTATTATCAGTGAGAAAAAATTTCTGGAGCAATTTGTGACCAGGTTTGAGGAGAGAGTTCCTCAGCTATTAAACATCTACAAAGGTAGTTTAGGACCTTTACCATAA 1350 0.403 MDVVVELPYCYLLLLSLIGIQRESFKTEFDGCPASGGNWSWQTDVGEFHITIQSIMLTFFIARLSSSLPCRRRTLIGSLHHNASHIFSSFSSLLELSESNQPKQKLEESESFTVSYLMNSLGLSPKVAIQVSKRVKLKDPDKPNSILNLLRSYGFLDTQISKIVNTYPRVLLAKPEKTLLPKLWFFQSIGFSCSELRELLVSDSRLLSRSLTKTIIPRYEALKSVLDDDEKVNIALKRSGWIYLHHDDVTNVVQNIKVLRDHGMPQSSVLPLLTRYARAAFMNHAQFLEYVKFAKETGIEPSKATFITAVNVLSQLRKSTWELKLNIFQRCGWSRDLTLLAFSKFPYCMLLSEENIRNSMKFLADEMGLPLEDIARCPTILSYSLKQRIIPRWSVVKILKRKGLIKNEQSLRSIIIISEKKFLEQFVTRFEERVPQLLNIYKGSLGPLP 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2272 449 PANTHER CGI-12 PROTEIN-RELATED 107 429 IPR003690 GO:0003690|GO:0006355
Dere04g2272 449 SMART mt_12 84 124 IPR003690 GO:0003690|GO:0006355
Dere04g2272 449 SMART mt_12 371 405 IPR003690 GO:0003690|GO:0006355
Dere04g2272 449 SMART mt_12 197 229 IPR003690 GO:0003690|GO:0006355
Dere04g2272 449 SMART mt_12 339 370 IPR003690 GO:0003690|GO:0006355
Dere04g2272 449 SMART mt_12 304 334 IPR003690 GO:0003690|GO:0006355
Dere04g2272 449 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Dere04g2272 449 Gene3D Transcription termination factor 3, mitochondrial 222 433 IPR038538 -
Dere04g2272 449 FunFam Mitochondrial transcription termination factor-like 211 434 - -
Dere04g2272 449 Pfam mTERF 318 423 IPR003690 GO:0003690|GO:0006355
Dere04g2272 449 Pfam mTERF 147 300 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2272 Dere-ChrDere04 26756418 26758967 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere04g2272 mTERF 1.4e-21 No_clan