Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2271 ATGTTTACGTTTCTGATAGCAAGATTATCTTCACCACAGCCTTGCAGGAGGAGGACCCAACTTGGTTCCCTCCTTCACAATGCTTCTCGCATTTTTAGTTCGTTTTCTTCAGATTTGATATTTTCTGAATCGAATCGACCAAAACAAAAATTAGAAGGAAATGAATCTTTTACTGTATCTTATCTCATGAACTCATTGGGCTTATCCTCCGAAATGGCTATTGAAGTATCCAAAAAGATTAAACTCAGAGACCCCGATAAACCCAACTCGGTATTTAATCTTTTCAGGAGCTACGGTTTCTCCGATACCCAGGTATCCAAAATTGTGAAAAGATTTCCATCAGTGCTTTTGGCAAAGCCTGAGAAGACCCTTTTGCCCAAGCTAAGGTTTTTCCAGTCTATAGGGTTTTCACGCAATGAACTACGAGAACTCCTCATATCTGACTCTAGACTCCTAAGTTGGAGCTTAATGAAAACTATAATCCCCCGTTATGAGGCCCTTAAGAGTGTACTTGATGACGATGTGAAGGTAAATGTAGCTTTAAAACGCTCAGGATGGATTTATTTCCACCATGATGTAACTGATGTAGTTCCGAACATAAAGGTTTTGAGAGAACATGGAGTGCCTCAGTCTTTTGTCTCTCAACTGTTAACTAATTTTGCAAGTGCAGCATTTATAAGTCATGCAAAGTTTGTTGAACATGTCAAGTTTGCTAAGGATATAGGAATCGAACCTTCTAGGGCTACTTTCATTCAAGCAATTTATGTGTTAGCAAAGACAAAGAAATCCACCTGGGAGTCAAAGGTGGATATCTATGAGAGGTGTGGTTGGTCCAGGGATGTCACTCTGTCAGCATTCAGGAAGAATCCATTTTGCATGCTTCTTTCAGAAGAAAATATCACAAAGTCAATGAAGTTTCTTGGGGATGAAATGGGTTTGCCAATGGAAGATATAGCTGGATGCCCAACAATTCTTCGCTATAGCTTGAAGGGGAGGGTTATTCCTAGATGGTCAGTACTTAAAATTTTGAAAATGAAGGGTTTGATCAAGAATGACCGGTCCTTACCTTCCATAATTATTATCAGTGAGGAAAAATTTCTGGAGCAATTTGTGATCAGATTTCAGGATAGTGTTCCTCAGCTAGTAAACATCTACAAAGGTCTAGGACCTTTACCTGAAGTTCAGTGA 1188 0.3939 MFTFLIARLSSPQPCRRRTQLGSLLHNASRIFSSFSSDLIFSESNRPKQKLEGNESFTVSYLMNSLGLSSEMAIEVSKKIKLRDPDKPNSVFNLFRSYGFSDTQVSKIVKRFPSVLLAKPEKTLLPKLRFFQSIGFSRNELRELLISDSRLLSWSLMKTIIPRYEALKSVLDDDVKVNVALKRSGWIYFHHDVTDVVPNIKVLREHGVPQSFVSQLLTNFASAAFISHAKFVEHVKFAKDIGIEPSRATFIQAIYVLAKTKKSTWESKVDIYERCGWSRDVTLSAFRKNPFCMLLSEENITKSMKFLGDEMGLPMEDIAGCPTILRYSLKGRVIPRWSVLKILKMKGLIKNDRSLPSIIIISEEKFLEQFVIRFQDSVPQLVNIYKGLGPLPEVQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2271 395 PANTHER CGI-12 PROTEIN-RELATED 55 372 IPR003690 GO:0003690|GO:0006355
Dere04g2271 395 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Dere04g2271 395 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Dere04g2271 395 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
Dere04g2271 395 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Dere04g2271 395 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Dere04g2271 395 SMART mt_12 29 69 IPR003690 GO:0003690|GO:0006355
Dere04g2271 395 FunFam Mitochondrial transcription termination factor-like 156 378 - -
Dere04g2271 395 Gene3D Transcription termination factor 3, mitochondrial 172 376 IPR038538 -
Dere04g2271 395 Pfam mTERF 93 307 IPR003690 GO:0003690|GO:0006355
Dere04g2271 395 Pfam mTERF 261 367 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2271 Dere-ChrDere04 26744552 26745739 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere04g2271 mTERF 6.9e-28 No_clan