Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2266 ATGAAGAATTCTCAGAGAAGCAGCGTAAGGCAGTACCACAAATCGGATCTTCCTCGTCTCCGATGGACTCCAGAACTCCATGAACATTTCGTTGAAGCTGTGGAAAGTCTCGGTGGAAAAGACGAGGCAACCCCAAAGCGTATTTTGCAGATGATGCGTGTGAAAGGATTGAGTATCTCTCACATTAAAAGCCATCTTCAGATGTACAGAAACATGAAGGGGCATGCCATTCTCTCACCAGTTGATAAGTTGCATAAAGGAAAAGCTCATGCTAATGATCTCCAAATCTGCTCCTTTTGCTCACCCCAAAGATCTGCCTCTGATGTCGCCATGTCCTCTTCTCTGGAATCGGCAAAACGGCAATGTCGTTTGATCTAA 378 0.4524 MKNSQRSSVRQYHKSDLPRLRWTPELHEHFVEAVESLGGKDEATPKRILQMMRVKGLSISHIKSHLQMYRNMKGHAILSPVDKLHKGKAHANDLQICSFCSPQRSASDVAMSSSLESAKRQCRLI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2266 125 Gene3D - 17 74 - -
Dere04g2266 125 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Dere04g2266 125 SUPERFAMILY Homeodomain-like 18 71 IPR009057 -
Dere04g2266 125 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 72 IPR006447 GO:0003677
Dere04g2266 125 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Dere04g2266 125 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 93 IPR046955 GO:0003700
Dere04g2266 125 FunFam Myb family transcription factor 16 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2266 Dere-ChrDere04 26666726 26671161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2266 7 73 G2-like Transcription Factor Family AT2G42660 65.672 9.39e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere04g2266 Myb_DNA-binding 1.7e-09 CL0123