Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2265 ATGCTTTATTTTCTCACTGCAAGATTATCTGCTTCACAAACGTGCAAGAGGGGGACCCAACTAGGTTTATTACATCGCAATGCTTCCCCCATTTTCTATTATTTTTCTTCTGCAGTGAAATCATCTGAACCGAGTCAATCGAAACAAAAACTAGAGGGAAATGAACCGTTTACAGTTTCCTATCTCATGAACTCATGTGGCTTCTCTGCCAAAGCAGCTTTTGAAGTTTCCAAGAGGATTAAGTTGAAAGACCCTGATAAACCCAACTCGGTACTTAATCTTTTCAGGAGCTACGGATTCTCTGATACGCAGATATCCAGAATTGTGAAAAAACATCCACGAGTGCTTTCGGCAAAGCCTGAGAAGACCCTTTTGCCCAAGCTACGATTTATCCAGTCTTTAGGGTTTTCGTGTTCTGAACTCCGAGAACTCTTCGTAACTAACTCTATACTCCTAAACTGGAGCTTAGAGAAACGAATAATCCCCCTTTATGTAGCCCTTAAGGCTGTACTTAATGACGATGAGAAAGTAAATATAGCTTTAAAACGCTCAGGATGGTTTGCTATCCCCCAGGATGTAACTAATATAGTTCCAAACTTAAAGGTTTTGACAGATCTTGGAGTGCCTCAATCTTCTGTCTTTCTACTGTTAACTGCATTGCCATATGCAGCATTTATGAATCATGCCAAGTTTGTTGAAAATGTCAAGTTTATTAAGGAAACAGGAATTAAGCCTTCCAAGTCTGCATTCGTGCAAGCAATTATTGTTTTAGCACAGATAAGGAAAACAACCTGGGAGTCAAAACTGGATATCTACGAGAGGTGTGGCTGGCCCAGGGATGTCACTCTGTTAGCATTCAGTAAGTTTCCATATTGCATGAATCTCTCAGAAGAAAAGATCACAAATACAATGAAATTTCTTGTAGATGAAATGGGTTTGTCATTGGAAGATATAGCTAAATGTCCAACAATTCTTAGCTATAGCTTGAAGCAGAGGATCGTTCCTAGATGGTCAGTAGTTAAAATTTTGAAAATGAAGGGTTTGATCAAGGAGGAGTGGTCTTTACCTTTTATTATTATTATCAGTCAGAACAAGTTTCGGGAGAAATTTGTGATGAGATTTCAGGAAAGTGTTCCTCAGCTACTGAAAATCTATGAGGGTGAATTCAGATCTTTACCTGAAGTTTAG 1188 0.3889 MLYFLTARLSASQTCKRGTQLGLLHRNASPIFYYFSSAVKSSEPSQSKQKLEGNEPFTVSYLMNSCGFSAKAAFEVSKRIKLKDPDKPNSVLNLFRSYGFSDTQISRIVKKHPRVLSAKPEKTLLPKLRFIQSLGFSCSELRELFVTNSILLNWSLEKRIIPLYVALKAVLNDDEKVNIALKRSGWFAIPQDVTNIVPNLKVLTDLGVPQSSVFLLLTALPYAAFMNHAKFVENVKFIKETGIKPSKSAFVQAIIVLAQIRKTTWESKLDIYERCGWPRDVTLLAFSKFPYCMNLSEEKITNTMKFLVDEMGLSLEDIAKCPTILSYSLKQRIVPRWSVVKILKMKGLIKEEWSLPFIIIISQNKFREKFVMRFQESVPQLLKIYEGEFRSLPEV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2265 395 Pfam mTERF 262 366 IPR003690 GO:0003690|GO:0006355
Dere04g2265 395 Pfam mTERF 92 307 IPR003690 GO:0003690|GO:0006355
Dere04g2265 395 Gene3D Transcription termination factor 3, mitochondrial 151 379 IPR038538 -
Dere04g2265 395 FunFam Mitochondrial transcription termination factor-like 156 378 - -
Dere04g2265 395 PANTHER CGI-12 PROTEIN-RELATED 56 372 IPR003690 GO:0003690|GO:0006355
Dere04g2265 395 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Dere04g2265 395 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Dere04g2265 395 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Dere04g2265 395 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2265 Dere-ChrDere04 26656086 26657273 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere04g2265 mTERF 8.9e-27 No_clan