Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2264 ATGCACTCGTTAGGCATGTCCTCCGAAGTGGCTACTAGTCTATCTAAAAGGGTTAAATTGAAATACCCAGATAAACCCGACTCGGTACTTAATCTTTTCAGGAGCTATGGTTTCTCAGATTCCCAGATACTTAAAATTGTGAAACAGTATCCGCCTGTGCTTTTGTCAAGTCCTGAGAAAACCCTTTTGCCCAAGCTAAGATTTTTCGAGTCTATAGGGTTTTCATGTTCTGAAATCCCAGAACTCCTCATCTCGAACAGTAGATTACTATGCTGGAGCTTAAAGAAGCGTATAATCCCCGGTTATGAGGCCCTTAAGAGTGTGGTTGGTGACGACATGGGAGTACATATAATTAGGAAACCCTCAGGATGGGATTTTCTCTACTGTGATGTGGTGAATGTGGTCCCAAACATTAAGATTTTGAGAGAGCATGGTGCACCTCAATCTACCGTCAATCTGCTGCTAAATAATTTTACAAGTACAGCATTTACCAATCATTCAAAGTTTGTTGAACACGTCAAGTTTGCTAAGGAAGCAGGAATTCAACCTTCTAAGACTACGTTCATCCATTCTATTCATGTGTTATCAATGACAAAGAAATCATCTTGGGAGTCAAAGCTGGACGTCTATGAGAGGTGCGGCTGGTCCAGGGATGTTACTCTTTTGGCATTCAGGAAGTTTCCATATTGCATGTTGCTGTCGGAGGAGAAAATCACAAGCACAATGAAGTTTCTTGTGGATGAAATGGGTTTGCCATTGAATGATATAGTTAAATTCCCAACACTTCTTGGTCATAGCTTGAAGCAAAGGATTATTCCTAGATGGTCAATTGGAACCTATACCCATTGTTCAGTCCTATGTATTTTGTTGGACGATATGATTGTGAATTTTTATAGACTTCCAGGAGAACAAAGATATGTAGAGGACAGTGTGACAAAAGAAGAAAGTGGGAAATTATCTGAAACAAAGAAACCAACACAGAAAAAAGATGAAACAGGTCTTGAATATACAAAGCATACAGAGTTTGTTGAATATGTCAAGTTTGCTAGGGAAACAGGAATTGAACCTTCTAAGGCAGCTCTCTCCTAG 1089 0.3976 MHSLGMSSEVATSLSKRVKLKYPDKPDSVLNLFRSYGFSDSQILKIVKQYPPVLLSSPEKTLLPKLRFFESIGFSCSEIPELLISNSRLLCWSLKKRIIPGYEALKSVVGDDMGVHIIRKPSGWDFLYCDVVNVVPNIKILREHGAPQSTVNLLLNNFTSTAFTNHSKFVEHVKFAKEAGIQPSKTTFIHSIHVLSMTKKSSWESKLDVYERCGWSRDVTLLAFRKFPYCMLLSEEKITSTMKFLVDEMGLPLNDIVKFPTLLGHSLKQRIIPRWSIGTYTHCSVLCILLDDMIVNFYRLPGEQRYVEDSVTKEESGKLSETKKPTQKKDETGLEYTKHTEFVEYVKFARETGIEPSKAALS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2264 362 MobiDBLite consensus disorder prediction 311 333 - -
Dere04g2264 362 SMART mt_12 80 112 IPR003690 GO:0003690|GO:0006355
Dere04g2264 362 SMART mt_12 253 286 IPR003690 GO:0003690|GO:0006355
Dere04g2264 362 SMART mt_12 44 75 IPR003690 GO:0003690|GO:0006355
Dere04g2264 362 SMART mt_12 186 216 IPR003690 GO:0003690|GO:0006355
Dere04g2264 362 SMART mt_12 221 252 IPR003690 GO:0003690|GO:0006355
Dere04g2264 362 Gene3D Transcription termination factor 3, mitochondrial 2 120 IPR038538 -
Dere04g2264 362 Gene3D Transcription termination factor 3, mitochondrial 121 286 IPR038538 -
Dere04g2264 362 PANTHER CGI-12 PROTEIN-RELATED 3 277 IPR003690 GO:0003690|GO:0006355
Dere04g2264 362 Pfam mTERF 30 182 IPR003690 GO:0003690|GO:0006355
Dere04g2264 362 Pfam mTERF 198 275 IPR003690 GO:0003690|GO:0006355
Dere04g2264 362 FunFam Mitochondrial transcription termination factor-like 94 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2264 Dere-ChrDere04 26621816 26625179 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere04g2264 mTERF 4.3e-16 No_clan