Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2258 ATGACCCTGAAGGTGTACGGCCCGTCTTACGCTTCCCCGAAAAGGGTGCTTGTGTGTCTGATCGAGAAGGAAATTGATTTTGAAGTAGTGCTTGTTGATATCTTCAAGGAAGAGCACAAGGATCCTGAGTTCCTCAAATTGCAGCCATTCGGAGTGCTTCCAGTTATTCAAGATGGAGACTATACTCTCTATGAATCCCGAGCAATAATCAGGTACTATGCAGAAAAGTATAAATCCCAAGGAACTGACTTGCTTGGAAAGACTATAGAAGAAAGGGGACTTGTGGAACAGTGGTTAGAAGTGGAAGCCCATAACTTCCACCCACCACTCTACAACTTGGTACTTCATGTTCTGTTCGCCCCAATCTTGGGAACCCCATCTGACCCAAAAGTGATTCAAGAGAATGAAGAGAAGCTTGGGAAGGTCCTGGACATCTATGAGGAGAGGCTCTCAAAGAGTAAGTACTTGGCTGGAGATTTCTTCAGCCTTGCTGATCTTAGCCACCTTCCTTTTGGGCATTATTTGATGAACCAAATGGGAAAAGGATATATGGTTAGGGAGAGGAAGCATGTGAGTGCTTGGTGGGATGATATTAGTAACAGGCCATCTTGGAAGAGGGTTCTCCAGCTCTACCAATACCCTATCTAG 648 0.4506 MTLKVYGPSYASPKRVLVCLIEKEIDFEVVLVDIFKEEHKDPEFLKLQPFGVLPVIQDGDYTLYESRAIIRYYAEKYKSQGTDLLGKTIEERGLVEQWLEVEAHNFHPPLYNLVLHVLFAPILGTPSDPKVIQENEEKLGKVLDIYEERLSKSKYLAGDFFSLADLSHLPFGHYLMNQMGKGYMVRERKHVSAWWDDISNRPSWKRVLQLYQYPI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2258 215 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Dere04g2258 215 CDD GST_N_Phi 2 76 - -
Dere04g2258 215 Gene3D Glutaredoxin 1 85 - -
Dere04g2258 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 209 - -
Dere04g2258 215 FunFam Glutathione S-transferase F2 86 208 - -
Dere04g2258 215 SFLD Main (cytGST) 4 201 - -
Dere04g2258 215 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Dere04g2258 215 CDD GST_C_Phi 90 208 IPR034347 -
Dere04g2258 215 Gene3D - 86 208 - -
Dere04g2258 215 Pfam Glutathione S-transferase, C-terminal domain 112 202 IPR004046 -
Dere04g2258 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Dere04g2258 215 FunFam Glutathione S-transferase F2 2 85 - -
Dere04g2258 215 SUPERFAMILY GST C-terminal domain-like 81 209 IPR036282 -
Dere04g2258 215 SFLD Glutathione Transferase (cytosolic) 4 201 IPR040079 -
Dere04g2258 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2258 Dere-ChrDere04 26550484 26551836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2258 1 215 Glutathione S-transferase Gene Family AT2G30870 60.000 2.86e-99 285