Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2245 ATGGCGAACGAGAAGGGTCATTATTATGATCAGTATGATCCTAGTTTCTATTACAACCACCAAAACCTTGTTCAAGGGTTTGATCACTCACACAGTACAAGCTTCACCGACTGCTTAAATGGAGGGTTCATGGACTACAGTACCCTCTCAAGAGCCTTTGATTTGTCTTGCTCATCAGCATCTGAAGTGGTCTCATCCTCCATTAACGACGACCTCAACCCAAAGAAGCCCACCACTAGTACTACTACTGCAGGAGACTCTCATGTGGGGCCCAATTCCTCTGTGTCTAATTCATCTTCTAATGAAGCAGAAGAAGCAGTGGTAACAGAAGAAGACTCAGCCAAGAGCATCAAGAAAGAGAAAGACCAAGATGGAGATGAAAAGTCTAAGAAAGAGAGCAAGGCAAAAGGAAATAAGAAAGAGAAAAAGCCAAGAGAGCCACGCTTTGCCTTCTTGACTAAAAGCGAGGTCGATCACTTAGAAGATGGATACAGGTGGAGAAAATATGGGCAGAAAGCAGTCAAGAATAGTCCTTACCCAAGGAGTTATTACAGATGCACAAGTCAAAAGTGCATTGTGAAGAAAAGGGTGGAGAGGTCATACCAGGACCCATCAATTGTGGTCACAACATATGAAGGGCAGCACAACCACCACTGTCCGGCGACACTCCGAGGCAATGCCGGCACCGCCATGATGTTACCGTCGCCGTCATCGCCTTCCCTTTTTGGCTCTGCACCTATGGGAGGGACAACAACATTGTTACCCCAAGAACTCCTTGCTCAATTGCTTCCAAGTTTTAGCCAAGATGATCACCAGAATCATCATCCTATGTTCCAACAAAACCCTAATTCCCATTATCATCATCATCATCATCCCCAGCAGCAACAGCACCAGATCCCTCATGACTTTGGGTTGTTGCATGACCTACTTCCCTCCTCCTCATCATTCCCGGGAAGTAAACCAGAGCCATGA 972 0.4599 MANEKGHYYDQYDPSFYYNHQNLVQGFDHSHSTSFTDCLNGGFMDYSTLSRAFDLSCSSASEVVSSSINDDLNPKKPTTSTTTAGDSHVGPNSSVSNSSSNEAEEAVVTEEDSAKSIKKEKDQDGDEKSKKESKAKGNKKEKKPREPRFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPSIVVTTYEGQHNHHCPATLRGNAGTAMMLPSPSSPSLFGSAPMGGTTTLLPQELLAQLLPSFSQDDHQNHHPMFQQNPNSHYHHHHHPQQQQHQIPHDFGLLHDLLPSSSSFPGSKPEP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2245 323 MobiDBLite consensus disorder prediction 108 148 - -
Dere04g2245 323 Gene3D WRKY domain 144 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2245 323 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 290 IPR044810 GO:0003700
Dere04g2245 323 FunFam WRKY transcription factor 57 146 220 - -
Dere04g2245 323 SUPERFAMILY WRKY DNA-binding domain 153 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g2245 323 MobiDBLite consensus disorder prediction 65 148 - -
Dere04g2245 323 MobiDBLite consensus disorder prediction 65 104 - -
Dere04g2245 323 MobiDBLite consensus disorder prediction 267 283 - -
Dere04g2245 323 MobiDBLite consensus disorder prediction 267 298 - -
Dere04g2245 323 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2245 323 ProSiteProfiles WRKY domain profile. 155 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g2245 323 SMART WRKY_cls 160 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2245 Dere-ChrDere04 26299039 26301049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2245 26 312 WRKY Transcription Factor Family AT4G18170 45.455 1.31e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere04g2245 WRKY 5.4e-25 CL0274