Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2241 ATGGATGAACCCCTTCTCACCAAGAAACTTGGAGTTGTAGCAGAATCATCAAGCAGGCCATCACCCAGAAGAGACTTTCGTTCATCATATATTGATGTTATCACCAATGAAGATGTCCTTCATATGATTACCACACCTAAGACTAGCTCTTCTTATTTGAATATCATAGCCAACTTGAACAGAAAAAAGAAGATCGTCCATCGCTCACACTCTGCTCCATCAGTTTTCACTAATACCAGAGAAGATTGTCACGATCCCTTTGACCTCAGAACTGCGCAACAATCGTCACCTTTGATAGTGAGACTTTCCTTCATTGGAGTCATCTTGTATGTGGCAATTGGGGTTTTTGTGTACTTGATAAGTGGGAGTTTCAAGGGTACATCCACATTCAAGCCTGTGGATGCTGTGTACTTTACAGTGGTAACTCTCTGCACCATAGGGTATGGTGATATCGTACCTGATACCGCATTCACCAAGATCTTCACTTGTGGCTTCATTTTAGTTGGATTCGGATTCATTGGTATTCTGCTAAATGGTTTGGTTACCTACATTTGTGATAGACAAGAGGCAATGTTATTGAGCACCATGAACGAGAATACAATATTTAGAACATATATGATAGACAAAGAGAAAGGAAGAATGAGGATAAGAACCAAAGTGTGTCTAGCTTTGGCAGTTGTTATATGTTGCATAGCTATAGGGACAATCGGTGCTCACTTTCTTGAGAACTTGGATTGGGTCGATAGTTTTTATCTCTCTGTTACTTCTGTCACTACAGTGGGTTATGGGGATTATGCTTTTATAACAGTCACAGGAAGGTGTTTTGCAATAATATGGTTGTTGGTGAGCACATTGGCAGTAGGCAGGGCCTTTCTATACCTAACCGAGTATAGTATTGATAAGAGAAATCGTACTATTGCAAAATGGATTCTTCAGAAGAAGATTACCTTGTCAGATTTAGTAGCTGCTGACCTTGACAATGATGGATCAATCAGCAAGTCTGAATTTGTCATATACAAGCTAAAAGAGATGGGGAAGGTAACTGCGGTAGACATACAGCAAATAAGCAAACAATTTGATTCATTGGACAATAGCAATTTTGGCAAGATTACTCTCGCTGATCTCATGGAAACAGTTTAA 1140 0.3965 MDEPLLTKKLGVVAESSSRPSPRRDFRSSYIDVITNEDVLHMITTPKTSSSYLNIIANLNRKKKIVHRSHSAPSVFTNTREDCHDPFDLRTAQQSSPLIVRLSFIGVILYVAIGVFVYLISGSFKGTSTFKPVDAVYFTVVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFIGILLNGLVTYICDRQEAMLLSTMNENTIFRTYMIDKEKGRMRIRTKVCLALAVVICCIAIGTIGAHFLENLDWVDSFYLSVTSVTTVGYGDYAFITVTGRCFAIIWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWILQKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKVTAVDIQQISKQFDSLDNSNFGKITLADLMETV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2241 379 Gene3D - 303 379 - -
Dere04g2241 379 SUPERFAMILY Voltage-gated potassium channels 95 184 - -
Dere04g2241 379 FunFam Two-pore potassium channel 2-like 98 194 - -
Dere04g2241 379 Gene3D - 88 204 - -
Dere04g2241 379 Pfam Ion channel 226 295 IPR013099 -
Dere04g2241 379 Pfam Ion channel 107 184 IPR013099 -
Dere04g2241 379 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 128 352 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dere04g2241 379 FunFam Two-pore potassium channel 3 203 317 - -
Dere04g2241 379 SUPERFAMILY EF-hand 322 376 IPR011992 -
Dere04g2241 379 PRINTS Two pore domain K+ channel signature 141 169 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dere04g2241 379 PRINTS Two pore domain K+ channel signature 258 267 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dere04g2241 379 ProSitePatterns EF-hand calcium-binding domain. 324 336 IPR018247 -
Dere04g2241 379 Gene3D - 205 302 - -
Dere04g2241 379 SUPERFAMILY Voltage-gated potassium channels 209 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2241 Dere-ChrDere04 26253853 26255800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2241 66 377 Ion Channels AT4G18160 52.532 7.11e-110 327