Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2239 ATGGCACAGATCATGCTCAACCACACTATGCTAGTTATTTTGATCTCCCTTATATCAATTTTGGACCCAGTTGAGCCATCATTGCCTAGACGTGCTGAGACAATGGCTTATATAAAGGCTACTTGCAAGAACACCCTCTATCAAGATCTATGCATCCGCTGCCTTTCCAGGTTTGCCCATCCTTCCATGGAAAACCCACAACAACTAGCTCAAATTGCCTTGTCCGCGAGCCACTCTAGAGCACTACGCACAAGGGCGTTCTTGTCCAAAGTGGCCATTCAGCTCAATGCAATCAAGAATAACAAAGATTACCCTGTTGTGCGAGATTGCTTGAAGGAAATTAGTGATAGTGCAGACCAACTTGAACAATCCATCAAAGAGCTTCGTCGGTTGAACCGGCTGAATCCTTTTGCCATAGATGACCAGCTTCTATGGCACATCAGTAATGTTGAGACATGGGTGAGCACTGCCTTAACTGATGCTAGCACATGTGTGGATTTGCTCCCAGGTCATAGGATGAGTAAATTGAAGGCTTCAATTAGGGTCAGGGCCCAGAATGTTGCAGAGATGACTAGCAATGCACTTGCCATATTTCATGGGTATGCAGCTAAGTACAAAGCAGCTAGAGCCACCAAAACACCCTGA 645 0.4558 MAQIMLNHTMLVILISLISILDPVEPSLPRRAETMAYIKATCKNTLYQDLCIRCLSRFAHPSMENPQQLAQIALSASHSRALRTRAFLSKVAIQLNAIKNNKDYPVVRDCLKEISDSADQLEQSIKELRRLNRLNPFAIDDQLLWHISNVETWVSTALTDASTCVDLLPGHRMSKLKASIRVRAQNVAEMTSNALAIFHGYAAKYKAARATKTP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2239 214 CDD PMEI-like_3 40 199 - -
Dere04g2239 214 SMART PMEI_2 33 197 IPR006501 GO:0004857
Dere04g2239 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 200 IPR035513 -
Dere04g2239 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 199 IPR035513 -
Dere04g2239 214 NCBIfam pectinesterase inhibitor domain 9 201 IPR006501 GO:0004857
Dere04g2239 214 FunFam Pectinesterase inhibitor 3 33 202 - -
Dere04g2239 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 197 - -
Dere04g2239 214 Coils Coil 111 134 - -
Dere04g2239 214 Pfam Plant invertase/pectin methylesterase inhibitor 37 197 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2239 Dere-ChrDere04 26229493 26230137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2239 4 200 Carbohydrate Esterase AT5G53370 28.037 1.58e-10 58.2