Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2238 ATGAAAAATCCGCAGCAGCTAGCTCAAATTGCCTTGTCCGCGAGCCACTCTAGAGCACTACGCACAAGCGCGTTCTTGTCCAAAGTGGCCATTCAGCTCAATGGAATCAAGAATAACGAAGATTACCCTGTTGTGCAAGATTGCTTGAAGGAAATTAGTGATAGTGCAGACCAATTTGAACAATCTATCAATGAGCTCCGTCATTTGAACCGGCCAAATCCTTTTGCCATTGACGACCAGCTTTTATGGCACATAAGTAATGTTGAGACATGGGTGAGTACTGCCTTAACTGATGCTAGCACCTGTGTGGATTCGCTCTCTGGTCATAGGATGAGTAAATTGAAGGCTTCAGTCAGTGTTAGGGCCCAAAATGTTGCGGAGATGACTAGCAATGCACTTGCCTTATTTCATGGGAATACAGCTACGTACAAAGCAGCTGCAGCAGCTGGAGCAACCAGAAAACCCTAA 468 0.4551 MKNPQQLAQIALSASHSRALRTSAFLSKVAIQLNGIKNNEDYPVVQDCLKEISDSADQFEQSINELRHLNRPNPFAIDDQLLWHISNVETWVSTALTDASTCVDSLSGHRMSKLKASVSVRAQNVAEMTSNALALFHGNTATYKAAAAAGATRKP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2238 155 Pfam Plant invertase/pectin methylesterase inhibitor 4 135 IPR006501 GO:0004857
Dere04g2238 155 PANTHER PECTINESTERASE INHIBITOR-LIKE 3 135 - -
Dere04g2238 155 Coils Coil 49 69 - -
Dere04g2238 155 SMART PMEI_2 2 135 IPR006501 GO:0004857
Dere04g2238 155 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 138 IPR035513 -
Dere04g2238 155 NCBIfam pectinesterase inhibitor domain 3 137 IPR006501 GO:0004857
Dere04g2238 155 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 137 IPR035513 -
Dere04g2238 155 CDD PMEI-like_3 2 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2238 Dere-ChrDere04 26220062 26220529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2238 45 142 Carbohydrate Esterase AT3G14310 29.293 1.22e-06 45.1