Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2234 ATGGCAGAGCTCAAGCTCAACCTCACGTTGCTTGTTATATTAATCTCACTTATATCAACTTTGGACCCAGCTGAGTCATCCATGCCTAGACGTGCTGAGACAATGGCCTATATAGAGGCTTCTTGCAAGACCACTCTCTATCAAGATCTATGCATCCGCTGCCTTTCCAAGTTTGCCCATCCCACCATGGAAAACCCACAACGTCTAGCTCAAATTGCCTTGTCCGTGAGCCACTCTAGAGCACTTGACACAAGGTCGTTCTTGTCCAAAGTAGCCATTCAACTCAATGCCATCAAGAATAACAAAGATTACTTTGTTGTGCAAGATTGCTTGAAGGAAATTGATGATAGTGTGGAACAGCTTGAACAGTCCATCAAGGAGCTTCGTTGGTTGAACCGGCCAAATCCTTTCGCCATTGATGACCAGCTTCTATGGCACTTCAGTAATGTTGAGACATGGGTTAGCACTGCCTTAACTGATGCTAGCACCTGTGTGGATTCACTTCCTGGTCATAAGATGAGTAAATTGAAGGCTTCAATTAGGGTTAGGGCCCAAAATGTTGCAGAGATGACTAGCAATGCACTTTGCCTTATTTGA 597 0.4456 MAELKLNLTLLVILISLISTLDPAESSMPRRAETMAYIEASCKTTLYQDLCIRCLSKFAHPTMENPQRLAQIALSVSHSRALDTRSFLSKVAIQLNAIKNNKDYFVVQDCLKEIDDSVEQLEQSIKELRWLNRPNPFAIDDQLLWHFSNVETWVSTALTDASTCVDSLPGHKMSKLKASIRVRAQNVAEMTSNALCLI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2234 198 Coils Coil 111 131 - -
Dere04g2234 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 198 IPR035513 -
Dere04g2234 198 NCBIfam pectinesterase inhibitor domain 5 197 IPR006501 GO:0004857
Dere04g2234 198 CDD PMEI-like_3 40 198 - -
Dere04g2234 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 196 - -
Dere04g2234 198 FunFam Pectinesterase inhibitor 3 33 198 - -
Dere04g2234 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 198 IPR035513 -
Dere04g2234 198 SMART PMEI_2 33 197 IPR006501 GO:0004857
Dere04g2234 198 Pfam Plant invertase/pectin methylesterase inhibitor 37 196 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2234 Dere-ChrDere04 26151403 26151999 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2234 36 198 Carbohydrate Esterase AT3G14310 22.561 2.94e-08 51.2