Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2233 ATGGCCAAATTTGTGACAGGACACAGTGAAGCCACAGACAAGGAATATGTTGCATCTGTTTCTCCTTTAGTTACATCTTCCGTGAATCGTGATGCAGGGGAAATACAAATAGTTCATCGGTTGTTTGCTTGCGTTCCTATGATCAAAGTCGTATATCGTCGTGATGCACAGGTTGTATCTGATGGTTCTAAAAAAATAGTTTCTGACTCCATTTCATCTCCTCTGCAAAACGCTAGGAAGCATATTATTGCTGAGGAAACTCCTAGGCATGAACACCTTACCATGTCATCTATTCCCAGTTGTAGTTCTCAAAAGTCCGACGTGGTGACTACTTCACCGCCAACTGTGAGGACAAGATTGCAAAGTAGATACCTTCACATGTTTCCGAGAGAAATGGTAACGCAGCCAAGCATAACTTTACTTGTGACACAATCAGAACCTGCAAATTCTAGCAATGCAGCTATCACCTCACAAAAGGTCATGAATCTCAATGCCTTTGCTCAGCAGTATAGGGCTGCACGTTCCCAGAATTTCACGATACAACCTTCACAACAATCAGCTGCTGCCTGGTCACGCCAGAACCATCAATATATGGCAACCAACAATTCACCTCAAGAATATTCTAGTATTGCAGATAATCAAGCTTGGGCAGACATGAGAGATGCATTTGTTTCTGGAGATCTTGGGTCTTCTTCATATCAGTCTGTAACCTTACCGCATAATCAACCGGACTATATGATACCTTCAAGTAATTTTGATGAGCTTGGGTCTTCTTCGTATCATTCTGTAACCTTACCGCATAATCATCCGGACTATATGATACATTCAACTAATTTTGATGAGCTTTTGGCTTCTCAGTTTTGTGGTGGGCATTACTTTAGCTCAAATCAACAGTCTGCTGAACAGCATGGCATATTTTCTACATGGGATTATGGGATTGAATCAAATCCTTCATCTCCCCTGGAAAGCACACGTCATAACTTACCAAGACAACAAAATCAGGCTACATCTCAACGTTTAGCTCCTGCATATTCTGATGTTCTTCGATCTCAGCCAGGGGTTGCAAGAGAATTTCAGCAACGAGAAACTCAGTACTTAAGCTTCCAACTAGATGACAGAAATTTGCTCTTGGTGACTGCACATTTGGCAATAGACCAGCATATAGCGTCCCCTGTGTTAGGTGAAATGGACAGAGAGCAGGAACATGATAAGGGGATGAACCAGAATAGGCCAAGCATTGATGTACCAAAAGCAGTTTCTCCAGTTTCTTTTGCAGCAGAGGAAGAAACCATCAGGCGACCTCGTGGCCGGCCTGCCGGATCCAAAAACAAGCCAAAGCCACCCATTATTGTCACTAGGGACAGTGCTAATGCACTAAGGGCTCATGCACTGGAAGTGAGTTCTGGTTGCGATATTAATGAAAGTTTGCTCAACTTTGCAAGAAGGAAGCAGCGTGGGATTTGCATACTCAGTGGAACTGGCTGTGTAACAAATGTAATGCTGCGTCAACCAGCCTCTTCTGGTGCAACAGTGACCCTCCATGGTCGGTTTGAGATTCTCTCACTGCTTGGTTCAATCCTGCCACCACCGGCTCCGCCGGGGATCACCGGTCTGACCATTTACCTAGCCGGAGCTCAGGGGCAGGTTGTGGGTGGTGCTGTAGTGGGTGCTCTGGTTGCTTCAGGCCCCGTGGTGATCATGGCTGCTTCGTTCATGAATGCTACTTTTGATCGTCTGCCATTGGAGGATGATGAGATTGCTCAGAATCAGCGTTACCAAAATGGTCGAAGCCATCATCATCATCATCTTGATGTCTCAGATTTGCATGGAATGCCACAGAACTTGCTCACGAATGGTACAATCCCCCCTGAGATATACTCTTGGACTCCTGGGAGGAACTTCTCAAAAGCCTGA 1914 0.4504 MAKFVTGHSEATDKEYVASVSPLVTSSVNRDAGEIQIVHRLFACVPMIKVVYRRDAQVVSDGSKKIVSDSISSPLQNARKHIIAEETPRHEHLTMSSIPSCSSQKSDVVTTSPPTVRTRLQSRYLHMFPREMVTQPSITLLVTQSEPANSSNAAITSQKVMNLNAFAQQYRAARSQNFTIQPSQQSAAAWSRQNHQYMATNNSPQEYSSIADNQAWADMRDAFVSGDLGSSSYQSVTLPHNQPDYMIPSSNFDELGSSSYHSVTLPHNHPDYMIHSTNFDELLASQFCGGHYFSSNQQSAEQHGIFSTWDYGIESNPSSPLESTRHNLPRQQNQATSQRLAPAYSDVLRSQPGVAREFQQRETQYLSFQLDDRNLLLVTAHLAIDQHIASPVLGEMDREQEHDKGMNQNRPSIDVPKAVSPVSFAAEEETIRRPRGRPAGSKNKPKPPIIVTRDSANALRAHALEVSSGCDINESLLNFARRKQRGICILSGTGCVTNVMLRQPASSGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALVASGPVVIMAASFMNATFDRLPLEDDEIAQNQRYQNGRSHHHHHLDVSDLHGMPQNLLTNGTIPPEIYSWTPGRNFSKA 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2233 637 MobiDBLite consensus disorder prediction 95 115 - -
Dere04g2233 637 MobiDBLite consensus disorder prediction 316 339 - -
Dere04g2233 637 FunFam AT-hook motif nuclear-localized protein 459 586 - -
Dere04g2233 637 Pfam Plants and Prokaryotes Conserved (PCC) domain 460 572 IPR005175 -
Dere04g2233 637 CDD DUF296 460 542 IPR005175 -
Dere04g2233 637 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 403 597 IPR014476 GO:0003680
Dere04g2233 637 MobiDBLite consensus disorder prediction 425 449 - -
Dere04g2233 637 ProSiteProfiles PPC domain profile profile. 456 594 IPR005175 -
Dere04g2233 637 Gene3D - 458 604 - -
Dere04g2233 637 SUPERFAMILY AF0104/ALDC/Ptd012-like 456 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2233 Dere-ChrDere04 26094001 26101453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2233 398 630 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 70.763 1.46e-98 300