Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2226 ATGCAGCAAGATCACAGGAAAAAGAGTTCAACGGAGATAGAATTTTTCTCTGAATATGGTGATGCCAACCGGTATAAAATTCACGAAGTCATTGGGAAAGGAAGTTATGGTGTTGTTTGTTCAGCAATTGACACTCACACCGGTGAAAAGGTGGCAATAAAGAAGATACATGACATTTTTGAACACATCTCTGATGCTGCACGTATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGACATCCGGATATTGTTGAAATTAAGCACATTATGCTGCCTCCTTCTAGTAAGGACTTTAAAGATATTTATGTTGTCTTTGAGCTCATGGAGTCTGATCTTCACCAAGTCATCAAAGCCAATGATGACTTAACGAAAGAGCACTATCAGTTTTTTCTTTATCAGCTACTTCGAGCTTTGAAGTATATTCACACTGCAAATGTCTATCATCGAGATCTGAAACCAAAGAATATACTGGCCAATGCAAACTGTAAACTCAAAATTTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCTCCAGAGCTTTGTGGATCATTTTTCTCGAAGTATACACCGGCAATTGATATTTGGAGTATAGGTTGCATCTTTGCTGAAGTGCTGACTGGAAAACCACTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACTGATCTGCTTGGGACTCCCTCACTAGATACTATATCCCGGGTTCGTAATGATAAGGCAAGGAGATATCTAACTAGCATGAGAAAAAAGCAACCTGTGCCATTTGCACAGAAGTTTCCAAATGCAGATCCTTTGGCACTACGACTACTGGAAAGATTGCTTGCCTTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCATTGGCTGATCCTTACTTCAAGGGACTGGCAAAAGTTGAGAGGGAACCATCTTGCCAGCCTATCACGAAAATGGAGTTTGAATTTGAAAGGCGAAGGGTCACGAAGGAGGAAATACGGGAACTAATCTTCCGTGAGATTTTAGAGTATCATCCACAACTATTGAAAGACTACATAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCCGTTGATCACTTCAGGAAGCAGTTTGCTCATCTTGAGGAAAATAATGGTAAAAATGGCCCTGTTATGCCTCTTGAAAGAAAGCATGTTTCTCTTCCAAGGTCGACAATTGTACATTCAAATATGGTTGCACCGAAAGAGCAGTCAAATATTACTTCCTGCAAAAGCAGGCAAACAGCCGAGGAATATAATAAGAACTCCAGAGATACAGAAATTCCTGTGCCAAGGTCAATGCAGGGGCAGCAGAGAATTCCGCTAGCAAAACCGGGCAAAGTTGTTGGGCCAGTTGTTCCGTATGAGTATGCAAGTGTTGTCAAGGACTCTTATGATCCAAGGACTTTTATCAGAGGGTCTGTGCTTCCTTCTCAAGCCGTTCACCCTGCATATTATTACCAAAGATCAAGCTCGGGAAATCAGGAAAGGTCAGCTGCAACGGAAACTGAAAAGGGTGTGTCTTTGCAGGCCAAGCATGCCCATTGTGAAGTTCGTGCCAAAATAGCACCAGATATAGCTATTAATATCGATACAAACCCCTTTTTTATGACACGGGCAGGAGTGAACGGGATTGAACAGGATGATCGAATTACTCTCGACACGAACTTAATGCAGACGAAGGCTCAGTATGGTGGAATTGGTGCTGCTGCTGCTGGGGCCACTGCTCATAGAAAGGTTGGTCCTGTTCAGTATGGAATGACTAGGATGTTTTAG 1848 0.4199 MQQDHRKKSSTEIEFFSEYGDANRYKIHEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYINGTERTNFLYPSAVDHFRKQFAHLEENNGKNGPVMPLERKHVSLPRSTIVHSNMVAPKEQSNITSCKSRQTAEEYNKNSRDTEIPVPRSMQGQQRIPLAKPGKVVGPVVPYEYASVVKDSYDPRTFIRGSVLPSQAVHPAYYYQRSSSGNQERSAATETEKGVSLQAKHAHCEVRAKIAPDIAINIDTNPFFMTRAGVNGIEQDDRITLDTNLMQTKAQYGGIGAAAAGATAHRKVGPVQYGMTRMF 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2226 615 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Dere04g2226 615 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Dere04g2226 615 FunFam Mitogen-activated protein kinase 15 118 - -
Dere04g2226 615 FunFam Mitogen-activated protein kinase 111 339 - -
Dere04g2226 615 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dere04g2226 615 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2226 615 CDD STKc_TDY_MAPK 24 361 - -
Dere04g2226 615 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Dere04g2226 615 MobiDBLite consensus disorder prediction 427 463 - -
Dere04g2226 615 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2226 615 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Dere04g2226 615 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 369 - -
Dere04g2226 615 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2226 Dere-ChrDere04 25986606 25992855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2226 1 439 MAP Kinase Gene Family AT2G42880 87.133 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dere04g2226 Pkinase 1.5e-67 CL0016