Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2207 ATGGACGTCACCAGCAAGTCCCAAGCTCGCTTCACGCTGGGTAGGCAATCCTCTCTCGCGCCGGAACGACAGGACTCCGGCGCCGATGATGTTGGGCCGGAGGCGTTGGACTCGAGCGTGAGGTTGATGTACTTGGCGAACGAAGGGGATTTGGATGGAATCAAGGAGCTCTTGGACTCCGGAAGCGATGTCAATTTCAGAGACATCGATGGCCGCACCGCTTTGCACGTCGCCGCTTGTCAGGGTCTCACGGATGTCGTCGAATTGCTGATCCAAAGGGGCGCTGAGGTCGAACCAAAGGACCGCTGGGGCAGCACGCCTTTAGCAGATGCAATGTACTACAAAAATCATGATGTTGTGAAGCTTTTGGAGAAACATGGTGCAAAGCCTCCGATGGCTCCCATGCATGTCCAAAATGCTCGTGAAGTCCCAGAATATGAGATTGACCCTTCTGAACTTGATTTTACAAATAGTGTTCACATAACAAAGGGAACTTTCAGTATTGCATTATGGCGTGGCACTCACGTTGCTGTCAAAACACTTGGGGAGGAAGTATTAACTGATGATGACAAAGTGAAGGCATTTCATGATGAGCTTGCATTACTTCAGAAAATACGGCATCCAAATGTAGTCCAATTTTTAGGAGCTGTAACACAGAGCACCCCAATGATGATTGTTACAGAATATTTACCTCAGGGAGATCTTGGTGCTTACTTGAAAGGAAGAGGTGCATTAAAACCAATAAAAGCTGTGAAGTTTGCACTTGACATTGCAAGGGGAATGAATTACCTGCATGAACATAAACCAGAAGCAATTATACACCGAGATCTTGAACCTTCAAATATACTGCTGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTCAAAGTTGCAAAAACTATCAAAGAAGACAAACCTGTGACTAGCCAGGATACTTCATGGCGCTATGTTGCTCCAGAGATCTATAGAAATGAGGAGTACGATACCAAAGTGGATGTCTTTTCATTTGCTCTGATTTTAAAGGAAATGATTGAAGGTTGTCCACCATTTTCTAAAATGCCGGAAAAAGAAGTTCCTAAAGCATATGTTGCCAATCAACGTCCAGAATTTAAAGCTTCACCTAAGCTTTATGCTCATGGACTAAAAGAGTTAATTGAGGAATGTTGGGATAAAGAACCACACAGGAGACCAACTTTCCGCGAAATAATTGAGAGATTGGAAGAAATCAGCAACCATCTTGCACGTGAAAAGCGCTGGGAGGATTGTACCTCTAGATGCTTCCGGAATCTGAGGGGCTTGTTTCAGCGGGATCGTACGAATCCAGGCAGCTGGTCGTCTCGCTCAAGGACCAGATGA 1374 0.4563 MDVTSKSQARFTLGRQSSLAPERQDSGADDVGPEALDSSVRLMYLANEGDLDGIKELLDSGSDVNFRDIDGRTALHVAACQGLTDVVELLIQRGAEVEPKDRWGSTPLADAMYYKNHDVVKLLEKHGAKPPMAPMHVQNAREVPEYEIDPSELDFTNSVHITKGTFSIALWRGTHVAVKTLGEEVLTDDDKVKAFHDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLGAYLKGRGALKPIKAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILLDDSGHLKVADFGVSKLLKVAKTIKEDKPVTSQDTSWRYVAPEIYRNEEYDTKVDVFSFALILKEMIEGCPPFSKMPEKEVPKAYVANQRPEFKASPKLYAHGLKELIEECWDKEPHRRPTFREIIERLEEISNHLAREKRWEDCTSRCFRNLRGLFQRDRTNPGSWSSRSRTR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2207 457 Gene3D - 34 139 IPR036770 -
Dere04g2207 457 MobiDBLite consensus disorder prediction 1 33 - -
Dere04g2207 457 MobiDBLite consensus disorder prediction 1 23 - -
Dere04g2207 457 PIRSF ILK 1 435 - -
Dere04g2207 457 FunFam Integrin-linked protein kinase family 18 146 - -
Dere04g2207 457 FunFam Os01g0748600 protein 141 432 - -
Dere04g2207 457 Pfam Protein tyrosine and serine/threonine kinase 172 412 IPR001245 GO:0004672|GO:0006468
Dere04g2207 457 SUPERFAMILY Protein kinase-like (PK-like) 158 426 IPR011009 -
Dere04g2207 457 Gene3D Transferase(Phosphotransferase) domain 1 140 436 - -
Dere04g2207 457 Pfam Ankyrin repeats (3 copies) 42 130 IPR002110 GO:0005515
Dere04g2207 457 SMART ANK_2a 37 66 IPR002110 GO:0005515
Dere04g2207 457 SMART ANK_2a 70 99 IPR002110 GO:0005515
Dere04g2207 457 SMART ANK_2a 103 132 IPR002110 GO:0005515
Dere04g2207 457 CDD STKc_MAP3K-like 161 412 - -
Dere04g2207 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 95 422 - -
Dere04g2207 457 SUPERFAMILY Ankyrin repeat 41 133 IPR036770 -
Dere04g2207 457 ProSiteProfiles Protein kinase domain profile. 155 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2207 457 ProSiteProfiles Ankyrin repeat profile. 37 69 IPR002110 GO:0005515
Dere04g2207 457 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Dere04g2207 457 FunFam serine/threonine-protein kinase STY46-like 148 231 - -
Dere04g2207 457 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2207 Dere-ChrDere04 25564331 25572984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2207 8 435 MAP Kinase Kinase Kinase AT4G18950 66.590 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Dere04g2207 PK_Tyr_Ser-Thr 2.7e-56 CL0016