Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2187 ATGATTTGCTCCGTGAAACAATCCGGGATAGCGATCAGAGGTTTTTCTTCTGATACTATTTCCCGGAAAAATCATTCAAATACAGTTCAGATATCTTCGTTTTCGCCTTCTCTTCCTAGAGCAAAACCCCTGAAATCTCATGTTTCTGTGCAAAAACCTTTGTACTTTTCTTCTATTGGGAAATATGACTCGGTGAAACCTCAAGAACAACACAGTTTGATCGCATGTAAAGCGTACGAGGCAGAGCGATCAAACATTGAAACAAACACACCGTCAGAGGCAGCTAAAAAACTGAAAATTGGGATATACTTCGCAACATGGTGGGCTCTGAACGTGGTCTTTAATATTTATAATAAGAAGGTTCTGAATGCATATCCCTACCCTTGGCTTACTTCCACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACGAGGATAGCTGAGGCGCCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTTCCTGTTGCTGTTGCACATACAATAGGACATGTAGCGGCAACTGTTAGCATGTCAAAAGTTGCAGTTTCATTCACCCACATCATCAAGAGTGGTGAGCCTGCATTTAGTGTCCTGGTTTCAAGATTTCTTTTGGGTGAGACCTTCCCGGTGCCAGTCTATCTTTCCTTGATTCCGATCATTGGTGGATGTGCTCTTGCTGCTGTGACTGAGCTCAATTTCAATATGACTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTATTTCGGAATATCTTTTCAAAAAGGGGCATGAAGGGAAAGTCTGTCAGTGGAATGAACTACTACGCTTGTTTGTCAATGTTATCTCTTTTAATTCTCACACCATTTGCATTTGCTGTGGAGGGACCGCAGATGTGGGCTGCCGGATGGCAAACAGCCCTCTCACAAATCGGACCCCAATTCATATGGTGGGTGGCAGCTCAGAGTGTGTTCTATCATCTGTACAACCAGGTCTCATATATGTCTCTGGACCAGATCTCTCCTTTGACATTTAGCATTGGGAACACCATGAAACGCATATCAGTGATAGTCTCCTCAATCATTATTTTCCACACACCAGTTCAGCCTATCAACGCTCTTGGAGCCGCTATTGCAATCCTTGGAACCTTCTTGTATTCACAGGCAAAACAATAG 1176 0.4303 MICSVKQSGIAIRGFSSDTISRKNHSNTVQISSFSPSLPRAKPLKSHVSVQKPLYFSSIGKYDSVKPQEQHSLIACKAYEAERSNIETNTPSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSMLSLLILTPFAFAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2187 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 291 388 - -
Dere04g2187 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 98 390 IPR004696 GO:0016020|GO:0022857|GO:0055085
Dere04g2187 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 234 - -
Dere04g2187 391 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
Dere04g2187 391 PANTHER SOLUTE CARRIER FAMILY 35 99 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2187 Dere-ChrDere04 25101947 25105681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2187 1 390 Antiporters AT5G54800 75.689 0.0 573