Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2167 ATGAGCATCTTCCTCACTTCCTTCCTTCTCCTAATCCCTCTTGTCCTTCTTTTCACCAGAATCAGATCATCATCGTCAAGAAAAAATGTTCCTCCGGGTTCTCTGGGAATCCCCATAATAGGTCAAAGCCTCGGCCTCCTTCGTGCCATGCGCGCCAACACCGCCGAGAAATGGGTCGAAGAAAGAATACGCAAGTACGGTCCGATTTCGAAGCTCAGCCTGTTCGGGAAGCCGACGGTTTTCATGTACGGACAAGCGGCAAACAAGTTTCTGTTCAGCAACGACAGCGGAGCCCTGGCGAACCAGCAGACGCAGGCCATCAAGATACTTCTAGGAGACCGGAATTTGATGGAACTGAGCGGATCGGATCACAAGCGGGTCAGAAACGCGCTTGTTTCGTTCTTGAAGCCCGAATCGTTGAGGCAGTATGTGGGGAAAATGGATAAGGAAGTGAGGAATCACATTGAGATGCATTGGGACGGAAAGGAGCAGGTCACGGTCTTGCCATTGATGAAGACCCTCACATTCGACATAATTTGCTCTCTTCTGTTTGGGCTCGAGCGAGGCAAACAAAGAGAAGAGTTGGGGGCTTCCTTTCAGGTATTGATAAAAGGAGTGTGGGCAGTCCCTTTAAACCTGCCTTTCACATGCTACAACCGCAGCCTCAAAGAAAGTGCAAAGATTCAAAGCTTGGTGAAGGAGCTTATTCGCAGGAAGAAGATGGATCTTGAGCAGAACAGGGCTACTCCTCACCTGGACCTCATCACCTGCTTGCTTGGAATGCATGACAAAGACAAGATGACAGAGAAGGAGATCATCCACAATGTTATGCTTATCATGGTTGCTGGGCACGACACTGCATCTGTTCTTATTACTTTCATGATCAGATTGCTGGCTATTGAACCCGCTGTTTATGCAGCTGTTCTTCAAGAACAAGAAGAGGTGGCAAAAAGCAAGCCTACTGGAGAGTCATTGACCTGGGAAGACCTTAGAAAGATGAAGTACACCTGGAGAGTAGCATTGGAAACTCTAAGAATGATTCCCCCGGTCTTTGGAGGGTTTAGAAAGACTGTGAAGGATATAGACTATGAAGGATATCTCATCCCCAAAGGCTGGCAAATATTCTGGGTGGCTCCAATGACCCACATGGACAACAGCATATTCCCAGAACCATCAAAGTTTGATCCAAGCAGATTTGAAAACCAGGCATCTATCCCACCCTACTGCTTCATCCCATTTGGAGCGGGACCAAGAGTATGCCCAGGATACGAGTTTGCTAAGTTTGAGACACTGGTGGCAATCCATTATATAGTCACAAGGTTTTCTTGGAAGCTATGTGCAGACATTGCCTTCAATAGAGATCCCATGCCAGTACCCTCTCAAGAACTGCCAGTTCAAATCTGCCCCAGGCACAAGAGAGCAAGAACAGCAGTGTCATGGCCACACCCAAGGTTAAAGATTTCCAAGTGGGTTTCTGCCTTTAGAACTTTAGGTGCTGCCGCAATAAGTTTTGGGATTTCCTTGTTAAGATTTTGA 1536 0.474 MSIFLTSFLLLIPLVLLFTRIRSSSSRKNVPPGSLGIPIIGQSLGLLRAMRANTAEKWVEERIRKYGPISKLSLFGKPTVFMYGQAANKFLFSNDSGALANQQTQAIKILLGDRNLMELSGSDHKRVRNALVSFLKPESLRQYVGKMDKEVRNHIEMHWDGKEQVTVLPLMKTLTFDIICSLLFGLERGKQREELGASFQVLIKGVWAVPLNLPFTCYNRSLKESAKIQSLVKELIRRKKMDLEQNRATPHLDLITCLLGMHDKDKMTEKEIIHNVMLIMVAGHDTASVLITFMIRLLAIEPAVYAAVLQEQEEVAKSKPTGESLTWEDLRKMKYTWRVALETLRMIPPVFGGFRKTVKDIDYEGYLIPKGWQIFWVAPMTHMDNSIFPEPSKFDPSRFENQASIPPYCFIPFGAGPRVCPGYEFAKFETLVAIHYIVTRFSWKLCADIAFNRDPMPVPSQELPVQICPRHKRARTAVSWPHPRLKISKWVSAFRTLGAAAISFGISLLRF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2167 511 FunFam Taxadiene 5-alpha hydroxylase 21 470 - -
Dere04g2167 511 PANTHER CYTOCHROME P450 26 28 458 - -
Dere04g2167 511 Gene3D Cytochrome P450 20 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 SUPERFAMILY Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 CDD CYP90-like 62 469 - -
Dere04g2167 511 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g2167 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Dere04g2167 511 Pfam Cytochrome P450 31 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2167 Dere-ChrDere04 24825515 24830018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2167 22 441 Cytochrome P450 AT5G45340 32.619 6.03e-77 247