Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2146 ATGGTTGATTTGGAAGTTCAGATTCCCACCCCCTTCGATCCATTCGCTGAGGCCAAAGAATCGGATGCTCCCGGAACCAAAGGGTATGTGCACATCAGGATACAACAGAGGAATGGAAAGAAAAGCCTAACCACAGTGCAAGGACTGAAGAGGGCTTTTAGCTACGAGAAGATCCTCAAGGACCTGAAGAAGGAGTTCTGTTGCAACGGCAACGTTGTGCAGGACAAGGAGCTCGGCAAGATCATTCAACTCCAAGGTGATCAGCGCAAGAACGTCTCTCAATTCCTGGTTCAGGCCGGTCTGGTTAGAAAGGATCAGATCAAGATTCATGGTTTTTGA 339 0.4838 MVDLEVQIPTPFDPFAEAKESDAPGTKGYVHIRIQQRNGKKSLTTVQGLKRAFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVRKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2146 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Dere04g2146 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Dere04g2146 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Dere04g2146 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
Dere04g2146 112 NCBIfam translation initiation factor SUI1 6 112 IPR005874 GO:0003743
Dere04g2146 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Dere04g2146 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Dere04g2146 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Dere04g2146 112 Gene3D - 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2146 Dere-ChrDere04 24581944 24582282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2146 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 81.250 6.20e-67 195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g2146 04 24581944 24582282 Dere04g2146 04 24581944 24582282 ECH