Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2108 ATGAAGAGGGATCACCAAGATACCTGTGCCGGTGCTAGCTATGGCGGAGGAGGAAGAAATGGAAATATTGCTGCTGCTGCTGTGAAAGCCGAATGCTCATCAATGTCAAGTGGGAAAGCGAAGATGTGGGAGGAAGAACCCGAGGCGGGTGGGATGGATGAGCTGCTTGCCCCTTTGGGTTACAAGGTGCGGGCGTCGGACATGGCGGGTGTGGCGCAGATGCTTGAGCAGCTGGAGATGGTGATGGGCACAACTCAGGAAGATGGAATTTCGCATCTCGCTAGTGACACCGTCCACTATGACCCTACTGATCTCTACGGATGGGTTCAGAGCATGCTCACTGAGCTCAACAATTCCCCCAATCCTCTCGATCCATCGGGGCTCTTGGGCAGCCAGCAAATCGACGACCCTATTCTTGCTCCGGCGGAGTCCTCCACCATAACCTGCGTTGATTTCTCCAATTCCCGTCATCAGATTGGAAATCAATCGCGTGCTTACAACGATGATTCAGAATACGACCTTCGAGCAATTCCCGGCATGGCGGCGTATCCTCAAAACGAGCAGAATCCAGAGAGGGAAAACATCAACAAGCGATTGAAAAGTTCACCAGGTGGATCAGATTCTGTGCCGGTGCTACCGTCGCCTACGGGGACGGTGTCGGAGCCCACCCGACCAGTGGTTCTCGTGGACTCGCAAGAAACAGGCGTGCGTCTCGTCCACACACTCATGGCTTGTGCAGAGGCAATTCAGCAGAACAACCTGAAGGTTGCAGACACGCTTGTGAAGCACGTGGGGTTGCTCGCGGCATCTCAAGCTGGAGCAATGAGAAAGGTAGCTTCCTACTTTGCCCAAGCCTTAACTAGCCGAATTTACGGAATCTATCCTGAAGAAGCTCTCGATTCCTCTTTCTCCGATGTGCTTCATATGCATTTCTACGAATCCTGCCCCTACCTCAAATTCGCCCATTTCACCGCAAACCAAGCCATTCTCGAAGCATTCACCACCGCCGACAGAGTCCACGTCATCGATTTCGGACTCAAGCAGGGGATGCAATGGCCCGCTCTAATGCAAGCCCTCGCATTAAGGCCCGGCGGCCCTCCCACGTTCCGCCTCACCGGAATCGGCCCTCCGCAGCCGGACAACACCGACGCTCTGCAACAAGTGGGTTGGAAGTTGGCACAATTGGCCGAAACAATCGGTATCCAATTCGAATTCCGCGGGTTCGTCTGCAACAGTTTAGCGGATCTCGACCCGTCTCTCCTCGAGATCCGACCCGAAGAAGCCGTCGCGGTTAACTCCGTTTTCGAGCTCCACCGTATGCTAGCTAGACCCGGTGCCATCGACAAGGTGTTGAACACGATCAAGGCCTTCAACCCGAGGATCGTGACGATAGTGGAACAGGAAGCGAACCACAACGGAGTGGTTTTCTTGGACCGGTTCACGGAGGCGCTGCACTACTACTCCAGCCTGTTTGACTCGCTGGAGGGATCGTCGTCCGGGTTAGCACAGCCGAGTCAGGACCTGATTATGTCGGAGCTGTACCTTGGGAGACAGATATGCAACGTGGTGGCGTGCGAAGGGTTAGAACGGGTCGAGAGGCATGAGACGCTGAGCCAGTGGAGGACAAGGATGAGATCTGCCGGGTTCGACCCGGTTCACTTGGGTTCGAACGCGTTCAAGCAAGCTAGTATGTTGTTGGCTCTGTTCGCTGGCGGCGATGGGTATAGAGTGGAAGAGAACAATGGGTGTCTCATGCTCGGGTGGCACACGCGCCCACTCATCGCCACCTCGGCGTGGAAAATTCCCGCCGGCGAGCATAGTGAGTTGACTCAGTGA 1836 0.5517 MKRDHQDTCAGASYGGGGRNGNIAAAAVKAECSSMSSGKAKMWEEEPEAGGMDELLAPLGYKVRASDMAGVAQMLEQLEMVMGTTQEDGISHLASDTVHYDPTDLYGWVQSMLTELNNSPNPLDPSGLLGSQQIDDPILAPAESSTITCVDFSNSRHQIGNQSRAYNDDSEYDLRAIPGMAAYPQNEQNPERENINKRLKSSPGGSDSVPVLPSPTGTVSEPTRPVVLVDSQETGVRLVHTLMACAEAIQQNNLKVADTLVKHVGLLAASQAGAMRKVASYFAQALTSRIYGIYPEEALDSSFSDVLHMHFYESCPYLKFAHFTANQAILEAFTTADRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGIQFEFRGFVCNSLADLDPSLLEIRPEEAVAVNSVFELHRMLARPGAIDKVLNTIKAFNPRIVTIVEQEANHNGVVFLDRFTEALHYYSSLFDSLEGSSSGLAQPSQDLIMSELYLGRQICNVVACEGLERVERHETLSQWRTRMRSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKIPAGEHSELTQ 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2108 611 FunFam DELLA protein GAI 51 116 - -
Dere04g2108 611 SMART DELLA_2 53 126 - -
Dere04g2108 611 ProSiteProfiles GRAS family profile. 229 600 IPR005202 -
Dere04g2108 611 Pfam GRAS domain family 238 600 IPR005202 -
Dere04g2108 611 MobiDBLite consensus disorder prediction 196 222 - -
Dere04g2108 611 MobiDBLite consensus disorder prediction 199 222 - -
Dere04g2108 611 Pfam Transcriptional regulator DELLA protein N terminal 53 120 IPR021914 -
Dere04g2108 611 Gene3D - 51 116 IPR038088 -
Dere04g2108 611 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 184 596 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2108 Dere-ChrDere04 24143156 24144991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2108 54 601 GRAS Transcription Factor Family AT3G03450 63.357 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere04g2108 GRAS 9.1e-139 CL0063