Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2077 ATGGAGACCTCTGTCTATGCCACTGAAGCAAGCGGCATCACTGAGCGTGATAAAGAGCAAAATGGTGGTTCACAAGATACACCTTGGTTTTTGCATAGGTGCCTTGATTTCATCAATAGAGTCTCTATTCTTTGTACACCTCAGTCAGTCATTCTTCAGTTACACAATGAACTGGCACTAGATCAGAAAGCAAGCATCATATCTAAAGAAAAACTGAGTGCTTCTTCTTCCAGAAAAGTGGTCAAGGTTGAGCAAGTGCCCCAACGTAAGGTCCGCCAGCCAAGGTGGCTTGAGCCTTTGCTGAGAAAAACTTTCTTTGGCCCTTGTGCTGATCATCCAATGCGTAGGAATAAATTAAATAGATACTGTACAACCTGCTGTCGATCAGCTTGCCAATATTGTGTGTCTTCAGATACTCATAGTCGTCACAAGATACTTAAAGTCTTTAGGCATATCTACAAAGATGTAGTCGCCCTTGCTGCTGTGGAAAAATATATTGACTGTTCACAAATTCAGCCCTACAAATGCAATAAGCGATTGGTTATTGCTCTGAATCCTCTTCCACACAGTGGTGCAGCATTAAATGATGAAGTATTATGTGTGATCTGTGGTAGAAGGCTGAGTGACCCTGATTCATATCGGTACTGCTCCATTTCATGCAAGGTCAAAGCTGTATCAAGAAAGCCTAATGGTTCAGTTCCTCCCTTCATTACCATCCAGAGTCGTCCAAGGAAAAGAAAAGTGGTAACTTCTGAACCCCAAAAGCTTCCAAGGAAGAGAAAGGGAACACCCTGCAGAGCTCCCTTCTTCTAA 813 0.428 METSVYATEASGITERDKEQNGGSQDTPWFLHRCLDFINRVSILCTPQSVILQLHNELALDQKASIISKEKLSASSSRKVVKVEQVPQRKVRQPRWLEPLLRKTFFGPCADHPMRRNKLNRYCTTCCRSACQYCVSSDTHSRHKILKVFRHIYKDVVALAAVEKYIDCSQIQPYKCNKRLVIALNPLPHSGAALNDEVLCVICGRRLSDPDSYRYCSISCKVKAVSRKPNGSVPPFITIQSRPRKRKVVTSEPQKLPRKRKGTPCRAPFF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2077 270 ProSiteProfiles Zinc finger B-box type profile. 109 148 IPR000315 GO:0008270
Dere04g2077 270 CDD Bbox2 109 148 - -
Dere04g2077 270 Pfam PLATZ transcription factor 150 222 IPR006734 -
Dere04g2077 270 Pfam B-box zinc finger 108 147 IPR000315 GO:0008270
Dere04g2077 270 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 91 269 - -
Dere04g2077 270 MobiDBLite consensus disorder prediction 245 259 - -
Dere04g2077 270 MobiDBLite consensus disorder prediction 242 270 - -
Dere04g2077 270 SUPERFAMILY B-box zinc-binding domain 109 147 - -
Dere04g2077 270 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2077 Dere-ChrDere04 23770593 23774727 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dere04g2077 PLATZ 2.3e-19 No_clan