Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2069 ATGAAAGCAAACTTTGATCTTGAAGCGGAGGCCTCTGTAGAAAATGAATTTGAAGTTAGCAGCCAGGTTGCTTCCAACATATCTACTCAAGAAACCTTCGCTAGTCCTTGCAGTGATCATAGCCTCGCTAACTCTTCCAACCTAGCAAATCCAACGGGGATAATTTATGCAAATTCAGATCCTATTTCACTTGACTTAACTCTCAACTTCAATAATGATGAGTTAGCAGGGGCTAGAGATTCCTTAGGACTCTCATTCTCAAGCACTAGTGAGAGTAGCAATGAACCTGTCTCTCAAACCACGGCAGCAACCATTCCCAGAGTTTTCTCATGCAATTACTGTCAGCGCAAGTTCTATAGCTCGCAGGCTCTTGGCGGCCACCAAAACGCACACAAGAGAGAAAGATCATTGGCAAAGCAGGCCATGAGAATGGGTTTCTTCTCTGAGAGGTATGCAAGTTTAGCATCTCTCCCTCTTCATGGTTCTTTCAGGTCCTTGGGGATAAAAGCACACTCTTCACAGCATTATGGTTCTTCACCAACAATGAGGCTTCATGAGATGAAAAGCAATGCAAGATTTGGGCAAGGATATTTTGGTCAACCAATTTTCTTGGAGGATGATGAGGCAGAATTTATGTGGCCTGGTAGTTTCCGTCAGGTTGCAGAGGTAGTTGATGCTCATAAAAATTTTCTACTGACTGAAAGTTCTCATTTGAGTTTTAGGGAGGTGAATCCACCAGTTGACATAGAGAAGGCCACACCTGATTTGGCATTAAAACTTTGA 783 0.4304 MKANFDLEAEASVENEFEVSSQVASNISTQETFASPCSDHSLANSSNLANPTGIIYANSDPISLDLTLNFNNDELAGARDSLGLSFSSTSESSNEPVSQTTAATIPRVFSCNYCQRKFYSSQALGGHQNAHKRERSLAKQAMRMGFFSERYASLASLPLHGSFRSLGIKAHSSQHYGSSPTMRLHEMKSNARFGQGYFGQPIFLEDDEAEFMWPGSFRQVAEVVDAHKNFLLTESSHLSFREVNPPVDIEKATPDLALKL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2069 260 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Dere04g2069 260 Gene3D Classic Zinc Finger 86 154 - -
Dere04g2069 260 FunFam Zinc finger protein 2 86 155 - -
Dere04g2069 260 SUPERFAMILY beta-beta-alpha zinc fingers 107 137 IPR036236 -
Dere04g2069 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
Dere04g2069 260 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 53 182 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2069 Dere-ChrDere04 23686314 23687096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2069 1 260 C2H2 Transcription Factor Family AT1G66140 44.755 3.62e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere04g2069 None None None