Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2067 ATGCCCTTGCAAGGGATTGTGATCGATCCCACTTCCACACGTTCTCCTCCTGATCTTTCCCTTCAAATAAGCCCTCCAAACACCTCTTCTTCTTTGATTTACAATAAGGAAGCCCACAATTCAAATTTGAGTTATCAAGCTCGCACTGAGCTGTCTCTAGGCTCCAATTTCAGCACAGACGAACCTCCTCCTTATTATCATCACAATCACACCCACTTCACTGCTACCACCACTACTGCCACCAGCACCACCACCACTCAGTTTAACCACATAAATTACGGAGTGTCATCGTCGTCGTTGTCGTCATCAGATGGCCTGAGGCCGATCAAGGGGATCCCGGTGTATCACAACCGCTGTTTTCCTTTCTTGCCAATGGACCGCACCAAAGACAAGGATCTTCATCATAATTATCAGAAGATGTGGCTATATCATCACATGCCCACTAACAACTCTTCTTCTTCTTCTTCTTCTTGGGCTTATAATAATAATGCTAATAATACCTTGGGAACATCGGGTTTGGATAATCCGATGTGGGTGTTAAACGGGTCGTCGGCGGCTAATTTCAAATCTCATCAATTGCACTACGGGGTTGGGGCTTGTCACAGTGAGGAAGCTGCATCCTCAGGGTTCATGAGATCCAGATTTTTGCCTAAACTACCCTCCAAGAGGAGCATGAGAGCTCCCAGAATGCGTTGGACTACCACCCTCCATGCCCGATTTGTTCACGCCGTTCAACTTCTTGGCGGCCATGAAAGAGCAACTCCAAAGTCAGTTCTGGAGCTGATGGATGTGAAGGATCTCACACTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACAGTTAAGACCACTGACAGGCCTGCTGCTTCCTCAGGCCAATCAGATGGATCTGGAGATGATGATGTCTCTCCGATCTGTGGCAGCACCGATCGCGGCGGTCTGAGCCAGTTTCCGAATCAAAGAGGCCTGGCTGATCGGTCAATGCAACAAGATGTAGACTACTCTTCTTCACCTACTCTATGGAGTAATTCTTCGAGGAGATTGCAAGCAATCCTTTATCCTTATAAATACTTTCACATCGAGTGCCATGGACAGATTGATGAAGCTTTGCAGGCAAAACGTAAGGTTGAAAATGCGTTTTACGTGCAGGAGTGCAATTCAACCCAAGTCAAGAACAATTTGTCAGGGTATAATATAGATTGCAAGGATCCAAGCTTGGAGTTTACATTAGGAAGACCAGACTGGAATGGCACAGGACAAGCCTAA 1269 0.4641 MPLQGIVIDPTSTRSPPDLSLQISPPNTSSSLIYNKEAHNSNLSYQARTELSLGSNFSTDEPPPYYHHNHTHFTATTTTATSTTTTQFNHINYGVSSSSLSSSDGLRPIKGIPVYHNRCFPFLPMDRTKDKDLHHNYQKMWLYHHMPTNNSSSSSSSWAYNNNANNTLGTSGLDNPMWVLNGSSAANFKSHQLHYGVGACHSEEAASSGFMRSRFLPKLPSKRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRPAASSGQSDGSGDDDVSPICGSTDRGGLSQFPNQRGLADRSMQQDVDYSSSPTLWSNSSRRLQAILYPYKYFHIECHGQIDEALQAKRKVENAFYVQECNSTQVKNNLSGYNIDCKDPSLEFTLGRPDWNGTGQA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2067 422 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 17 418 IPR044847 GO:0000976|GO:0006355|GO:0010158
Dere04g2067 422 NCBIfam myb-like DNA-binding domain, SHAQKYF class 228 281 IPR006447 GO:0003677
Dere04g2067 422 MobiDBLite consensus disorder prediction 285 330 - -
Dere04g2067 422 Pfam Myb-like DNA-binding domain 229 280 IPR001005 -
Dere04g2067 422 MobiDBLite consensus disorder prediction 1 22 - -
Dere04g2067 422 FunFam Myb family transcription factor 226 284 - -
Dere04g2067 422 MobiDBLite consensus disorder prediction 8 22 - -
Dere04g2067 422 MobiDBLite consensus disorder prediction 310 330 - -
Dere04g2067 422 Gene3D - 227 284 - -
Dere04g2067 422 MobiDBLite consensus disorder prediction 285 299 - -
Dere04g2067 422 SUPERFAMILY Homeodomain-like 225 281 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2067 Dere-ChrDere04 23672758 23676852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2067 1 416 G2-like Transcription Factor Family AT5G16560 40.268 2.42e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere04g2067 Myb_DNA-binding 1.8e-05 CL0123