Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2051 ATGCCCTCTTCCCACATCATGACAAATACTGGCGGAAGCACAAGGCTGGGATATCAAAACAGGGGAAATTGTAGCGAGTTACGACATTGTGTGTGGCAAAACCAAGAACCTCCTAGGCATTGTAAACTTCGAGGATATCGTCTTAAAACTAGAGTATCCTCTATAAATCCTCTGATTCTCGTACCATACAACGTAGAACAAGGAACAAAAGAAAAGAGCAATTGGGAGAGACTGGGAGAGAATAAAGTTAACATGTCAAAAGGAGATGGGGTTGTTCTTTTGGACTTCTGGGCAAGTCCATTTTGCTCAAGAGTGAAAGCTACTCTTGAAGAAAAGGGGGTGGCTTACGAGAATAGGCAGGAGAAATTATTTGGGGGAAAGAGCGATCTTTTGCTCAAGTCTAACCCCATTCACCAGAAAGTTCCTGTGCTCTTGCACAGGGATCAACCTGTGGTGGAGTCTTCAAACATTGTTGCTTACATTGATGAGGTCTGGCCTTCCAACCCTCTGCTTCCAGCTACCCCATATGAACGTGCCCACGCTCGTTTCTGGGCTGATTTCATTGACCAAAAGGTATTTGAAACTGGTAGGGGAATCTGGACAAGCAAGCCGGGATCAGAAGAGCAAGAATTGGCCAAGAAGGACTTCATTGAAGTACTGAAGCACCTGGAGGGTGCTCTCGGAGAGAAGGATTATTTTGGAGGTGATGCATTTGGGTATGTGGACATTTTAGCAATCGGTTTAACCTCATGGTTCTTTACTTATGAGAAGGTTGGGGGATTCAAAGTGAAAGATCACTGTCCCAAATTCTCATCCTGGATCAAGAGGTGCTTGCAGAGACCCTCTGTTGCCAAAACCTATCCTGACCCAGAAAAAGTCTACCAATTTGTCCTCTCCATGGTTCAACCATAG 912 0.4496 MPSSHIMTNTGGSTRLGYQNRGNCSELRHCVWQNQEPPRHCKLRGYRLKTRVSSINPLILVPYNVEQGTKEKSNWERLGENKVNMSKGDGVVLLDFWASPFCSRVKATLEEKGVAYENRQEKLFGGKSDLLLKSNPIHQKVPVLLHRDQPVVESSNIVAYIDEVWPSNPLLPATPYERAHARFWADFIDQKVFETGRGIWTSKPGSEEQELAKKDFIEVLKHLEGALGEKDYFGGDAFGYVDILAIGLTSWFFTYEKVGGFKVKDHCPKFSSWIKRCLQRPSVAKTYPDPEKVYQFVLSMVQP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2051 303 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 94 295 IPR045073 -
Dere04g2051 303 SFLD Main.3: Omega- and Tau-like 89 299 IPR045073 -
Dere04g2051 303 CDD GST_N_Tau 91 165 - -
Dere04g2051 303 FunFam Glutathione S-transferase U20 174 303 - -
Dere04g2051 303 SFLD Main (cytGST) 89 299 - -
Dere04g2051 303 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 174 296 IPR010987 -
Dere04g2051 303 Gene3D - 174 302 - -
Dere04g2051 303 Gene3D Glutaredoxin 85 173 - -
Dere04g2051 303 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 89 169 IPR004045 -
Dere04g2051 303 Pfam Glutathione S-transferase, N-terminal domain 93 163 IPR004045 -
Dere04g2051 303 SUPERFAMILY Thioredoxin-like 91 192 IPR036249 -
Dere04g2051 303 SUPERFAMILY GST C-terminal domain-like 163 301 IPR036282 -
Dere04g2051 303 CDD GST_C_Tau 175 300 IPR045074 GO:0004364|GO:0006749
Dere04g2051 303 FunFam Glutathione S-transferase GSTU6 86 171 - -
Dere04g2051 303 Pfam Glutathione S-transferase, C-terminal domain 204 281 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2051 Dere-ChrDere04 23517921 23519561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2051 88 297 Glutathione S-transferase Gene Family AT1G78380 56.398 7.12e-80 239