Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2049 ATGGCACCTGTTTCGCTGCCTCCTGGTTTCAGGTTCCACCCTACAGACGAAGAGCTGGTTGCTTATTATCTCAAAAGAAAGATCAATGGCCGTAAGATTGAGCTAGAGATCATCCCAGAAGTTGATCTTTACAAGTGCGAACCGTGGGACTTGCCAGGAAAATCGTTGTTGCCAGGAAAAGATTTGGAGTGGTATTTCTTCAGTCCTCGTGACAGGAAGTACCCAAATGGCTCAAGAACCAACCGAGCCACCAAGTCTGGATACTGGAAAGCCACAGGGAAAGATAGGAAAGTGAATTCTCAGTCTCGTGCTGTGGGGATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCCCCACATGGGTGTCGCACCAACTGGGTAATGCATGAGTATCGTCTTGACGAGAGTCAATGTGAAATTGTTTCTGGCCTTCAGGATGCATATGCTCTTTGTCGTGTGTTCAAGAAGACTGCAGTGATAACCACAAAAATTGGAGAACAATATGTGAATAGCAGTCATGGAAATCAGATTATTGCCAGTGATCAGTCATCTAGCATTGAACTATACTCTGAAGGAAGAGGCGAAGATTTAGAGAGCTCAAGCTATTTAATGTCTCTGGATCATAGCTCACCCCTTATTGCGAATGCCTCTGTGCCAGGAGACCAAGAAAAATGGTCACATGCACACTTCTTGTCTGCAGATCCTTTCTCTCTTCCAGTTTCTTCTTCATTACATCCCAACCATGGTGCCATACCATACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAGCATAGGTTGTCTATGCCTCCATTGGAGATGGAGGACTTTCCTCAAGTCGGGATTTCAGAACTGAAGATGCAGCCACAGCCCTCTGGTGGGAGCTGCAAAAATGAAACTGATGCGTTATTGCAGGAGATTCTTTCAGTTGCTCATGCTTCTCAGGAACTCATAAACCAGTCCAACTATTCGCACTCATGGGCTACTACTAGTACTCCAAATCAACATTATGCTCCTGTAGAACCAGAAGATGACTTCACTTTCATGGTTGGCAGAGACAGTGCTGCTGATAGTTATAATTATTACAACCACGCTATCTGGGAAGATCCAATAAGCTCAAGGTCAATAGAGATCGGGGGTCTGGATGATGATTTCAAAGCAGAGAGGATGGTTGAGAACTTAAGATGGGTTGGAATGTCAAACCAGGATTTAGAAATTAAGAGCTTCATGGAAGATCAGAAGGTCATCCCGATTGAGGATATTTCAAGTTTCCAAACAAACAGGGAAGGGAATGAGCTGGTGCAAGCGGAATGTGAAAATCAGCAACAAAATAGCAGGAAAGAACTCAATGATACTGACATAAACGACATCACATTGGGGTTTATCAACGAGGATGACACTAATGAGGACTTCATAGTTGAGGAAGGTGATTATTCAAGTTCTCCAAGCTTTGAAGTGGTTGAGGAAGTCAAAGTCAGCCATGGAATGTTTGTGTCCACAAGACAAGTAGCTAACACATTCTTTCACCAAATAGTCCCTTCACAAACCCTCAAGGTTCACCTTAATCCAGTAATTATGGCACAGAATCACTCCATAGAGAACGCAGAGACAGTTTCCTTCTTTAGAAACTTGAAGGTCTATGTGAACACGATAGGAAGTGCCATTGTATTCATATTTTCACTTCTGCTGATGCACTGCGTTCACTACTCAGACTCGCAGGATGTGAGGGAGAGAAGTTGGTGTGGTGCTAATAATAACGATAACAGCATGAAGAGAATGAGAGAATCTGCAGCTGACGAGAAAATCAAATGGAGTAATGAGAAGGAAAAGGTTTGGTTTGTGGGTATCAAAAGTGGGAAAGGATTCAGTGTGGTTTTGAAGAAGATAGGCATTTTTCTCACCATTTCTTTTGCTCTTTGTACCATGTGGGCTAACCTCATCATAGTTCATTAA 1965 0.4331 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGCRTNWVMHEYRLDESQCEIVSGLQDAYALCRVFKKTAVITTKIGEQYVNSSHGNQIIASDQSSSIELYSEGRGEDLESSSYLMSLDHSSPLIANASVPGDQEKWSHAHFLSADPFSLPVSSSLHPNHGAIPYPPSKVDIALECARMQHRLSMPPLEMEDFPQVGISELKMQPQPSGGSCKNETDALLQEILSVAHASQELINQSNYSHSWATTSTPNQHYAPVEPEDDFTFMVGRDSAADSYNYYNHAIWEDPISSRSIEIGGLDDDFKAERMVENLRWVGMSNQDLEIKSFMEDQKVIPIEDISSFQTNREGNELVQAECENQQQNSRKELNDTDINDITLGFINEDDTNEDFIVEEGDYSSSPSFEVVEEVKVSHGMFVSTRQVANTFFHQIVPSQTLKVHLNPVIMAQNHSIENAETVSFFRNLKVYVNTIGSAIVFIFSLLLMHCVHYSDSQDVRERSWCGANNNDNSMKRMRESAADEKIKWSNEKEKVWFVGIKSGKGFSVVLKKIGIFLTISFALCTMWANLIIVH 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2049 654 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Dere04g2049 654 FunFam Nac domain-containing protein 86 15 159 - -
Dere04g2049 654 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 263 - -
Dere04g2049 654 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Dere04g2049 654 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Dere04g2049 654 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2049 Dere-ChrDere04 23488781 23493119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2049 1 646 NAC Transcription Factor Family AT1G65910 46.097 1.74e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere04g2049 NAM 1e-40 No_clan