Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1987 ATGGAGTATTCTTTATTCTCCCTCCTTTCATTCTTTTGTGCTTATTCCAAGCTCTTTCTTTCTATCTTCAAAATACTAAAACACCCTTACTTTAAAGCTAAACCTCTCAACTACAAACTCCCCCCTGGTCCCAAACCCTGGCCTATTATCGGTAATTTACCTGAAATGCTTTCAAACAAGTCTGTGCCCAGATGGATACACAAGCTTATGAAAACCTTAGACACCGAAATTGCATGTATCCAGTTGGGAAATGTTCATGTGATCCCAGTGACTAGCCCTTCGATTGCCTGCGAGTTCTTGAAGAAACAAGATGATATTTTTGCATCAAGACCTTTAACCATGTCTTCTGGTCTCGTCTCAGGTGGCTATTTAACGGTGGCTCTCGGGCCAAACGGAGAGCAATGGAGGAAGATGAAGAAGATGATAAGCAGGGACTTGCTTTCTCCTGCGAAGCATCAATGGCTTCGTGGGAAAAGAATGGAGGAAGCTGATAATCTCGTGCGTTACGTATATAGCCAATCCAAAAGTCAGAATAATAATAGTGGTCTTGTGAATATGAGGGTTGCTGCTCAGCATTTCTGTGGGAATGTGATTAGGAAAATGATTTTCAATAAAAGATACTTCGGAGAGGGTAGGAAGGATGGAGGGCCTGGCTTTGAGGAAATAGAGCATGTGGATGCACTCTTCACAATGCTTGAATACCTTTATGCCTTCAGTGCTTCTGATTTTGTTCCATGCTTGAGAGGACTTGACTTGGATGGGCATGAGAGGAAGGTGAAGAACGCATTGAGAACGGTGAACAAGTATCATGATCCCATCATTGAAGCAAGAATCCAACAATGGAAGGATGGGACGAAGACTGAAGCAGAGGACTTGCTTGATGTTATGATCTCACTCAAAGATTCTAATAATAACCCATTCTTGACCGTTGAGGAAATCAAAGCGCAAATTATAGAACTGATGTTGGCAACAGTGGACAACCCATCAAACGCAGTCGAATGGGCACTCGCAGAAATGTTAAACCAGCCAGAGCTACTTCAAAGAGCCACTGAAGAATTGGATAGGGCTGTAGGCAAAGAGAGGTTGATCCAAGAATCAGATATACCAAAACTCAATTACATCAAAGCATGTGCAAGAGAAGCCTTTCGCCTTCATCCCATTGCTCCTTTCAACCTCCCACACGTCTCTATGTCTGACACTGTGGTTTCCAACTACTTCATCCCAAAGGGTAGCCATGTGTTGCTAAGCAGACAAGAACTCGGGCGAAACCCTAAGGTGTGGAAGGGAGATCCTCATGTGTTCAAACCTGAACGACATTTAAAGGCCGATGGGTCTGATGTGTCATTGTCTGAGCCAGATTTAAGGTTCGTGAGTTTTAGTGCAGGAAGACGTGGGTGTCCAGGAGTGGTGCTTGGGGCCACTATGACTGTGATGTTGTTTGCTAGATTGATTCAGGGGTTCACTTGGAATGTACCACCTAACCAATCAAGGATTGAGGCGGTTGATTATGAAAGTGATGCCTTACTTGCCAAGCCACTTGTGGCCATGGCAAACCCAAGGTTGCCAGAAGAGGTTTATCTCTGCAATTAA 1590 0.4403 MEYSLFSLLSFFCAYSKLFLSIFKILKHPYFKAKPLNYKLPPGPKPWPIIGNLPEMLSNKSVPRWIHKLMKTLDTEIACIQLGNVHVIPVTSPSIACEFLKKQDDIFASRPLTMSSGLVSGGYLTVALGPNGEQWRKMKKMISRDLLSPAKHQWLRGKRMEEADNLVRYVYSQSKSQNNNSGLVNMRVAAQHFCGNVIRKMIFNKRYFGEGRKDGGPGFEEIEHVDALFTMLEYLYAFSASDFVPCLRGLDLDGHERKVKNALRTVNKYHDPIIEARIQQWKDGTKTEAEDLLDVMISLKDSNNNPFLTVEEIKAQIIELMLATVDNPSNAVEWALAEMLNQPELLQRATEELDRAVGKERLIQESDIPKLNYIKACAREAFRLHPIAPFNLPHVSMSDTVVSNYFIPKGSHVLLSRQELGRNPKVWKGDPHVFKPERHLKADGSDVSLSEPDLRFVSFSAGRRGCPGVVLGATMTVMLFARLIQGFTWNVPPNQSRIEAVDYESDALLAKPLVAMANPRLPEEVYLCN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1987 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Dere04g1987 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1987 529 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1987 529 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1987 529 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1987 529 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1987 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1987 529 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1987 529 FunFam Cytochrome P450 9 33 524 - -
Dere04g1987 529 CDD CYP79 75 521 - -
Dere04g1987 529 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1987 529 PANTHER CYTOCHROME P450 98A9 31 526 - -
Dere04g1987 529 Pfam Cytochrome P450 41 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1987 529 Gene3D Cytochrome P450 34 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1987 Dere-ChrDere04 22727842 22731629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1987 8 526 Cytochrome P450 AT5G05260 56.405 0.0 609