Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1971 ATGGGTAATAATTGGTTCAAATTGTCAGATATGATACCAAGTGCATGGTTTTACAAGCTCAAAGACAAGAGCAGGTCGAGGAAGCAGAAAAATGCTCATGCTGCTAGCAACAAAGCAAGCTCACCTGCAATGTCCCAGAAGTCGCAGCCAAACCGTTTGCACTATTTCCCCACCGAACCATACAGAGCTGATAAGCTATTCAACTCACCAATTCGCACACAAGTCACAGACTTTCCATTCATTGATTCACCAAGGTCATCCAAGAGAAGGCTTCAGAGGAAAACCATTTACAAGCCTTCTCCCTCTGTTGTATCCACCGTCTCAGCCACTTGCAGCTGCCATTGGACTCGGCCAAATCAAACTGAGTCTCCAGATTACTATGCCTCTTCCATTGAAAGTTCTTCTTCTGAATTTGATATGTATGAATGTGTTACATCTGAGTCTGATGAGTATGATAGCTTTGCTGCTCCTGACTTGTTCAATGGGCTATCCTCTGATTGCAGTCGCAGGGTTAGTTCTTCCACTAATGATATCATCATCGACATGAACAACGAATCATTTGCTGGGAATCCTGAAAAGCTAGATGGACTTGAAACAATTTCACAGTTAGGCCTTGCTCCCATATTGACAAAGCCAGTGAGGTTTGATGATGAAGTCATTGAAGCAACTGAGTTGAGACGTTCATCTAAATTGGAGGAAAGCAGTAGAACTACGGCACGAAAGTCCTCTGCTAATTCTAGAGGCATAAGACTTAGAGTCAATTCTCCAAAACTTGCAAGCAGGAAAGTTCAAGCCTGTGCAAGAAGGAGTGTATCAACATCCAGTGCATGCAAGGTTTCGAGGAACACAGGGTTTCCAGAGGGTTTTGCAGTTGTCAAGTCCTCAATTGATCCACAAAGAGATTTCAGGGAGTCAATGGTGGAGATGATCATGGAGAACAATATCTGGGCATCAGAAGATTTGGAAGATCTGCTAGCTTGCTATCTCTCAATGAACTCAAGAGAATACCATGAACTCATTATTAAAGCATTTGAGCAAATTTGGTTTGACATGGCACAACTCAGAATGTAA 1071 0.4267 MGNNWFKLSDMIPSAWFYKLKDKSRSRKQKNAHAASNKASSPAMSQKSQPNRLHYFPTEPYRADKLFNSPIRTQVTDFPFIDSPRSSKRRLQRKTIYKPSPSVVSTVSATCSCHWTRPNQTESPDYYASSIESSSSEFDMYECVTSESDEYDSFAAPDLFNGLSSDCSRRVSSSTNDIIIDMNNESFAGNPEKLDGLETISQLGLAPILTKPVRFDDEVIEATELRRSSKLEESSRTTARKSSANSRGIRLRVNSPKLASRKVQACARRSVSTSSACKVSRNTGFPEGFAVVKSSIDPQRDFRESMVEMIMENNIWASEDLEDLLACYLSMNSREYHELIIKAFEQIWFDMAQLRM 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1971 356 MobiDBLite consensus disorder prediction 226 247 - -
Dere04g1971 356 Pfam Transcriptional repressor, ovate 295 351 IPR006458 -
Dere04g1971 356 MobiDBLite consensus disorder prediction 33 53 - -
Dere04g1971 356 Pfam DNA-binding domain 1 48 IPR025830 GO:0003677
Dere04g1971 356 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 58 351 IPR038933 GO:0045892
Dere04g1971 356 MobiDBLite consensus disorder prediction 27 54 - -
Dere04g1971 356 ProSiteProfiles OVATE domain profile. 291 350 IPR006458 -
Dere04g1971 356 NCBIfam uncharacterized plant-specific domain TIGR01568 289 351 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1971 Dere-ChrDere04 22491631 22492701 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere04g1971 Ovate 1.9e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1971 04 22491631 22492701 Dere05g0030 05 383534 384697 CCT
Dere04g1971 04 22491631 22492701 Dere04g1971 04 22491631 22492701 ECH