Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1954 ATGGCTCTTTCTTCTTCTTCTTCTTTCTCATCATCTGCCATTGTCATTGCCTTAGCTTTCTTCTTGTTAATCACAGGAAGCTCCTCAGCTCAACTCTCAGACAACTTCTATTCCAAGAGTTGTCCAAGGCTTTTCAACACAGTCCAATCTGTTGTTCATTCTGCTGTCCTCAAAGAACGTCGCATGGGAGCTTCTCTCCTTCGCCTCTTCTTCCATGACTGCTTTGTCAATGGGTGCGATGGATCTGTACTGCTAGATGACACTTCGTCGTTCAAAGGAGAGAAAACTGCAGGTCCCAACAATAACTCTCTGAGGGGTTTTGAAGTGATTGATGCTATTAAGTCTAAGGTGGAGGCTGAATGTCCTGGTGTCGTCTCTTGTGCTGACATTGTAGCCATTGCTGCTCGTGACTCTGTTGTTCTTCTTGGAGGGCCTAATTGGAAAGTGAAGCTTGGAAGAAGGGATTCCAAGACAGCTAGCTTGGCTGCTGCAAACAGTGGTGTCATCCCACCTCCTACTTCTACACTCAGCAACCTTATCTCAAGGTTTAAAGCTCATGGCCTCTCTGCTAAGGACATGGTGGCTTTATCTGGAGCACACACCATCGGGAAGGCAAAGTGTTCAAGTTTCAGAACTAGAATCCACAAAGAGACCGACATCAACACTTCATTTGCGAATGCGAGGAAGAGGACATGTCCCAGCACAAGTGGATCAGGAGACAACAACCTAGCAAACCTAGACTTCGTCACTCCAAATTACTTCGACAACCACTACTTCAAGAACCTCGTCAGCAAGAAGGGTCTGCTTCACTCTGATCAGGTGCTCTTCAATGGCGGATCCACTGATTCACTGGTTCGAGCTTACAGCAAGAATGTTAGAGCCTTCCACTCTGACTTTGCTACTGCCATGATCAAGATGGGAGATATCAATCCCTTGACTGGGAAGAAAGGACAGATCAGGAAGAACTGCAGGAGAGTGAATTAG 984 0.4644 MALSSSSSFSSSAIVIALAFFLLITGSSSAQLSDNFYSKSCPRLFNTVQSVVHSAVLKERRMGASLLRLFFHDCFVNGCDGSVLLDDTSSFKGEKTAGPNNNSLRGFEVIDAIKSKVEAECPGVVSCADIVAIAARDSVVLLGGPNWKVKLGRRDSKTASLAAANSGVIPPPTSTLSNLISRFKAHGLSAKDMVALSGAHTIGKAKCSSFRTRIHKETDINTSFANARKRTCPSTSGSGDNNLANLDFVTPNYFDNHYFKNLVSKKGLLHSDQVLFNGGSTDSLVRAYSKNVRAFHSDFATAMIKMGDINPLTGKKGQIRKNCRRVN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1954 327 SUPERFAMILY Heme-dependent peroxidases 31 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 FunFam Peroxidase 35 183 - -
Dere04g1954 327 Pfam Peroxidase 48 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 FunFam Peroxidase 170 306 - -
Dere04g1954 327 Gene3D - 35 327 - -
Dere04g1954 327 PANTHER PEROXIDASE 72-RELATED 29 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 ProSiteProfiles Plant heme peroxidase family profile. 31 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1954 327 Gene3D Peroxidase, domain 2 170 306 - -
Dere04g1954 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Dere04g1954 327 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601|GO:0042744
Dere04g1954 327 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1954 Dere-ChrDere04 22352367 22355089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1954 13 327 Peroxidase AT5G58400 66.667 5.08e-159 446