Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1950 ATGAACATAAATATTTTATCTCAAGTGTGTATGCTTAATAGCAAGGCAAAATGTCTTACTGTGCTTTTATGCCATTTTGGCTACACTTTGAAGTTGGTGACTCTGAATTTCATAGTTGAAAGAAACACTGGGAATGTTCTGAAGTTTGGCGGATTTGCAGAACTTGGGCACCGCCAGGGTGACTCAAATATGGCTGTCCCATATGGTTATAAAATTTGCTTCTGTGTGTTATTCATGATGTTAGGGTTAGCCTCTGCTCAGCTAACTTCAAACTTCTATGACACATCTTGCCCCAGAGCCCTCTCTATCATAAGAACCGCAGTGCTCAATGCAGTTTACAAAGAGCATCGCATGGGAGCTTCCTTGCTTCGTCTCCAATTCCATGACTGCTTCGTTAATGGATGTGATGCGTCAGTGTTACTGGATGACACGTCAAGCTTCACAGGAGAGAAGACAGCCGCAGCAAACACAAATTCTCTGAGAGGTTTCGAAGTGATCGACGACATCAAATCGCAGTTGGAATCTGCTTGTCCTGGAATCGTTTCTTGTGCTGATATTCTAGCCGTTGCAGCCCGAGATTCCGTTGTGTCTTTGGGTGGGCCAACATGGGAAGTGGGGTTAGGCAGAAGAGACTCAACCACTGCAAGCAAAGACGCAGCCACTCAGGATATTCCATCCCCTTTGATGGATCTCAGTGCTCTTATTTCTTCTTTTTCCAAAAAGGGTTTCACCACCAAGGAAATGGTTGCCCTCTCAGGAGCTCATACAACAGGACAAGCGAGATGCCAGCTATTCCGAGGTCGGATATACAACGAAACCACCATTGACACAGACTTCGCAACATCAGTGAAGTCAAACTGTCCCAGCCTTGGCAGCGACAACAACCTATCCCCACTCGATGTCACCACCAATGTTCTATTCGACAATGCCTACTTCAAGAACCTGGTCAACAAAAAAGGCCTTCTTCACTCGGATCAACAGCTCTTCAGTGGTGGCTCCACGGACTCTCAGGTCACTGCCTACAGCACCAACCCTACAGCTTTCCGTGACGACTTTGCCAGTGCCATGGTCAAGATGGGAAACCTTAGCCCTTTGACCGGCAAAAGTGGCCAGATTCGCACTAATTGCCGCAAGGTTAACTGA 1143 0.4672 MNINILSQVCMLNSKAKCLTVLLCHFGYTLKLVTLNFIVERNTGNVLKFGGFAELGHRQGDSNMAVPYGYKICFCVLFMMLGLASAQLTSNFYDTSCPRALSIIRTAVLNAVYKEHRMGASLLRLQFHDCFVNGCDASVLLDDTSSFTGEKTAAANTNSLRGFEVIDDIKSQLESACPGIVSCADILAVAARDSVVSLGGPTWEVGLGRRDSTTASKDAATQDIPSPLMDLSALISSFSKKGFTTKEMVALSGAHTTGQARCQLFRGRIYNETTIDTDFATSVKSNCPSLGSDNNLSPLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTAYSTNPTAFRDDFASAMVKMGNLSPLTGKSGQIRTNCRKVN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1950 380 Pfam Peroxidase 107 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 Gene3D Peroxidase, domain 2 225 359 - -
Dere04g1950 380 FunFam Peroxidase 225 359 - -
Dere04g1950 380 SUPERFAMILY Heme-dependent peroxidases 87 380 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 CDD secretory_peroxidase 87 379 IPR033905 GO:0004601|GO:0042744
Dere04g1950 380 PRINTS Haem peroxidase superfamily signature 119 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Haem peroxidase superfamily signature 300 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Haem peroxidase superfamily signature 181 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Haem peroxidase superfamily signature 199 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 ProSiteProfiles Plant heme peroxidase family profile. 87 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 Gene3D - 91 377 - -
Dere04g1950 380 PANTHER PEROXIDASE 72-RELATED 79 379 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 ProSitePatterns Peroxidases active site signature. 119 130 IPR019794 GO:0004601
Dere04g1950 380 PRINTS Plant peroxidase signature 161 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Plant peroxidase signature 246 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Plant peroxidase signature 314 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Plant peroxidase signature 97 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Plant peroxidase signature 180 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Plant peroxidase signature 298 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Plant peroxidase signature 354 367 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Plant peroxidase signature 121 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 PRINTS Plant peroxidase signature 199 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere04g1950 380 FunFam Peroxidase 91 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1950 Dere-ChrDere04 22321351 22329237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1950 83 380 Peroxidase AT5G05340 65.000 2.49e-141 403