Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1945 ATGGCTTCTACAGCTCTTCAATGGCTGAGCCTTGTAGGCATCATTTGGCTCCAAGCCATAAATGGCACAAATACCAATTTCCCTGCCTACTCATCCCAACTGAAGGAGCTCCTTTCAATTTCCCAAGTGCAACTCAATAACTTAGCTTTTGCTTCTGATGCAGGAAAACTTCTTGGCTGGTTCTCTGGCATGGCCTCTGTTCACCTTCCCCTCTGGCTTGTCCTCATGATCGGTTCAAGCCTTGGGTTGATTGGTTATGGAGTGCAATATCTCTTTATAACAAACCAAATTTCTTCTTTATCCTATTGGCATGTCTTCTTACTAACTGTTCTGGCTGGGAATAGCATTTGTTGGATTAACACTGTCAGTTATGTCACCACAATAAGGAACTTCCCATCTGATCACCAAGTTGCTGTGGGGTTAACAACTAGTTACCAAGGGTTAAGTGCGAAGATTTATACTGATATTGTTGATGTTCTTTCTCCACACAAAAAAGCTAGAGCCTTTCTTTTCTTGAACTCTGTCTTACCTCTGATAGTGAGCCTGATAGCAACTCCTGTAACTAGAGAAATAGAAGTAACAAGACCTAAGCGAATTAGTGTCGGATTTGTTGTAATGTTTGTTATTACAATTTCCACTGGCATATACGCTGTGTTAAGCAGCTTGCAATTTGTGTTAAGCAAATTATCTCCATTGAATAATCTAATTGGTATTTTAGTGTCCCTTCTTTTACCTCTCTTAGTTCCAATCTCAGAGAAGATCAACGAATTGGTGGGATCATGGCAAACCAATAGAGAAAAACTAAGAGTCTATCATTTTACTGTGGAGGAGAATAATTGTCCTAATGATGAGAGGACAGCGAGAGAGCTGAAAGAGGGAGAAGAAGAAGATAGCAACGGAGAGGTTCATGAGGTTGGTGTGAGAGAAGAAATTGGAGTAAAGTTAATGATGAGAAGAATTGATTTCTGGTTATATTTTCTCGTCTATTTCTTCGGTGCCACACTTGGTTTAGTATTTCTCAACAACCTGGGGCAAATTGCTGAATCCAGAGGCTGCTCTGATACTTCATCTCTGGTGTCCTTGTCTTCATCTTTTGGTTTCTTTGGCCGTCTCATACCGTCTCTCATTGACTACTTCTGCAGGGGTAAGGTTAGGATTTCAAGACCCGCATCTATGGTGGCATTGATGGCTCCAACAGCAGGAGCATTCTTCTTGCTGCTTAACAAAACTGAGCTTGCCCTCTACACCAGCACTGCCATAATAGGAGTGTGTACTGGAGCTATCACTTCCATTTCTGTGTCCACAACCACTGAGCTATTTGGCACAAAGAATTTCTCAGTGAACCACAACGTGGTGGTGGCCAACATTCCCATTGGCTCTTTTCTGTTTGGTTTCTTGGCTGCTCTTCTCTACCGTAGGGAAGAAGATGGAGATGGGAAATGCATGGGCATGGAGTGCTACAGAAGTACTTTCATCATCTGGGGTTCCCTTTGTTTCTTTGGGACCTTCTTGGCGTTCATTTTACATGCCAGGACCCGCAAGTTCTATTCAGAGAGACAGAGTTAG 1566 0.4246 MASTALQWLSLVGIIWLQAINGTNTNFPAYSSQLKELLSISQVQLNNLAFASDAGKLLGWFSGMASVHLPLWLVLMIGSSLGLIGYGVQYLFITNQISSLSYWHVFLLTVLAGNSICWINTVSYVTTIRNFPSDHQVAVGLTTSYQGLSAKIYTDIVDVLSPHKKARAFLFLNSVLPLIVSLIATPVTREIEVTRPKRISVGFVVMFVITISTGIYAVLSSLQFVLSKLSPLNNLIGILVSLLLPLLVPISEKINELVGSWQTNREKLRVYHFTVEENNCPNDERTARELKEGEEEDSNGEVHEVGVREEIGVKLMMRRIDFWLYFLVYFFGATLGLVFLNNLGQIAESRGCSDTSSLVSLSSSFGFFGRLIPSLIDYFCRGKVRISRPASMVALMAPTAGAFFLLLNKTELALYTSTAIIGVCTGAITSISVSTTTELFGTKNFSVNHNVVVANIPIGSFLFGFLAALLYRREEDGDGKCMGMECYRSTFIIWGSLCFFGTFLAFILHARTRKFYSERQS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1945 521 Pfam Nodulin-like 7 250 IPR010658 -
Dere04g1945 521 CDD MFS_Mch1p_like 6 502 - -
Dere04g1945 521 Gene3D MFS general substrate transporter like domains 270 508 IPR036259 -
Dere04g1945 521 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 517 - -
Dere04g1945 521 SUPERFAMILY MFS general substrate transporter 7 514 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1945 Dere-ChrDere04 22238250 22240154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1945 1 519 Nodulin-like Gene Family AT2G30300 48.968 2.31e-156 453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1945 04 22238250 22240154 Dere05g0043 05 628091 629899 CCT
Dere04g1945 04 22238250 22240154 Dere04g1945 04 22238250 22240154 ECH