Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1943 ATGGATGGAGAAGGCCAAAGGCAAAAGATGCACAATCTGTTTGCATATAAATATGACAACTATACGCCATATTCTTGCATATCTACCTATCTCATTAATTCCATGGCAAACCACAAGACAACCTTCTCAATTGATGCTAAGGATGTCGTCCTTGTTAAACCATCAAAATCAACACCTTCCACTATTCTTTCTCTGTCCACTGTCGACAACAATCCCGACCTTAACTTCCTTTGTCAAACAATCTATGTCTACCGCGCAAATCCTGATCATTCCCTTAAAAATGGCCAACCAGACCCATCATCTGTCATAAAAGAAGCCCTCTCAAAGGCTTTGTTTTTCTATTACCCTCTTGCAGGGAAGCTCGTGAGCCACACTGATGGAGAACTCAGAATCAACTGTAATGCTTCTGGGGTTCCATTTTTAGAGGCAAATGCGAACTGTGAACTCTCTTCTCTTCATTACCTTGATGGGTTCGACGTTGAAACTGCCAAACACTTCCTGTTTGATCAGCCTTTGGAGGGTGAGGCTGAGACTTCAGGTCACCATCTCTTGGTTTTACAAGTGACCAAGTTTCTATGTGGGGGTTTCACCATTGGTATGGGCTTGTCCCATTCTGTCTGTGATGGGTTTGGTGCGTCTCAGTTCTTAAGAGCCATAACTGAACTTGCAAGTGGAAAAGACGAGCCATCTGTGAAACCCGTGTGGGAGAGAGAGAGGCTATTGGGAACCATTCTTAAGGACCCAATACAATCTCCCATCGAAAAAGCTTCCCTTGCAACTTCACCATTTTGGCCAAGTACAGATCTTTCGCATCAATATTTTAACGTGAAGGGCGAGAGCATGAGAAGGGTCAAAACGAGTCTTATGAAGGAAATGAATGACACTGAAACTATGAAGGAAAGCTTCACAACTCTGGAATCACTTGGAGCCTACGTCTGGAGATCAAGAGCCAGAGCGTTGAAACTGAACTCTGAAGGAAAAACACTGTTCTGTGTAACAGTGGGGGTGAGGCACCTCGTGGATCCACCTTTGCCTGATGGGTATTACGGGAACGCTTTCGTGGCTGCGTACGTGGTTCTAACAGTGAAGGAGCTCAACGAGAGACCACTCTACGAGGTTGTGAAGCTCATCAAACAGAGCAAAAAAGTTGCTTTTAGCAGTGACTACATCAGACACTCGATCAACGTGTTGGAGACGATGAGAAAGGGGAATGTTAGAATGGAAGTGACAGGTTCATCAACGGTATTAACGGATTGGAGGCAGTTGGGGTTGCTGGAAGAAGTGGATTTTGGATGGAAGGGTTCGGTGAATGTCGTACCAGTACCATATGACATACATGGGTTCGTGGATTTCTGTCTTTTCTTGCCTCCTAGTAATCTGGATCCTTCCATGAGAGGTGGAGTTCGGGTCTTTGTGTGTCTACCTGAAGCTGCCATGCCCAAGTTCAGGGAGGAGATGGAGGCCCTCGAGCATATCAATGAGGATGATGGTGGCGATTAA 1500 0.454 MDGEGQRQKMHNLFAYKYDNYTPYSCISTYLINSMANHKTTFSIDAKDVVLVKPSKSTPSTILSLSTVDNNPDLNFLCQTIYVYRANPDHSLKNGQPDPSSVIKEALSKALFFYYPLAGKLVSHTDGELRINCNASGVPFLEANANCELSSLHYLDGFDVETAKHFLFDQPLEGEAETSGHHLLVLQVTKFLCGGFTIGMGLSHSVCDGFGASQFLRAITELASGKDEPSVKPVWERERLLGTILKDPIQSPIEKASLATSPFWPSTDLSHQYFNVKGESMRRVKTSLMKEMNDTETMKESFTTLESLGAYVWRSRARALKLNSEGKTLFCVTVGVRHLVDPPLPDGYYGNAFVAAYVVLTVKELNERPLYEVVKLIKQSKKVAFSSDYIRHSINVLETMRKGNVRMEVTGSSTVLTDWRQLGLLEEVDFGWKGSVNVVPVPYDIHGFVDFCLFLPPSNLDPSMRGGVRVFVCLPEAAMPKFREEMEALEHINEDDGGD 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1943 499 Gene3D - 255 486 IPR023213 -
Dere04g1943 499 PANTHER ACYL TRANSFERASE 4 42 488 - -
Dere04g1943 499 Pfam Transferase family 46 488 - -
Dere04g1943 499 Gene3D - 39 247 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1943 Dere-ChrDere04 22194938 22196437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1943 44 484 Monolignol Biosynthesis Gene Families AT5G48930 28.228 4.76e-38 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1943 04 22194938 22196437 Dere04g1943 04 22194938 22196437 ECH