Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1929 ATGTCATTGAGCTTGTCAAGGCATACCGAGCTTGGATTCAAAGTGGATCTTCTTAACTTTTGCCTTGGATGTGTTACCCTACAATTGATGAGGATCAGTTTGATGTTAGCTTTGGTTGGAGCTGCCTTTTGTTATACCGTCATCGTTCTTCGATCCTGTTTGGATTCCCAAGTGGAGATTGGGAGTGTTAGTGTGGCCGATCATTTAGCAGTAGATATTGATTCTGCGAACAGAGCTGATGATGGGTACGAGTGGATAAAATATGGGCAGAAGCAAGTGCAAGGAAATGGAAATTCACGAAGCTACTATGAATTCGCACACCCCAATTGCTCAACGAAGATGAAGGGTGAGAAATCTTTAAATGGGCATATCACTGATATGATTTACAAGGGCAGCCATAGCCATCCCAAGTCTCAATCTAGCACGACCTCATCATCTAGCTCATCTCTTGCAATTCCTCTTTCAATGGATTCGAGTGTGACACCTGATCAAAACGCGTCAGTATCAATGGGAGATGAGTTTGATGAAGATGAACCTGATGGCACGAGATGGAAAATAGAATGTGAAACTGAGGACGAGGGTATATTGACACTGGGAAGCAGAACAACGAGAGAACCCAGAGTTGTAGTCCACACATGCAGTGATGTCAACATTCTAGATGGTGGGTACAGATGGTGGAAATATGGGCGGAATGTAGTCAAGGGCAATCCAAATCCTAGGTCATACTACAAGTGCAGACACCTGGGATGTCCTGTAAGAAAGTTCGTACAGAGAGCTTTACATGAATCAGCCATAGTGACTACTACCTACGAGGGAAACCATAACCATGGCACCCCATATCAACTCTCACATTAA 855 0.4386 MSLSLSRHTELGFKVDLLNFCLGCVTLQLMRISLMLALVGAAFCYTVIVLRSCLDSQVEIGSVSVADHLAVDIDSANRADDGYEWIKYGQKQVQGNGNSRSYYEFAHPNCSTKMKGEKSLNGHITDMIYKGSHSHPKSQSSTTSSSSSSLAIPLSMDSSVTPDQNASVSMGDEFDEDEPDGTRWKIECETEDEGILTLGSRTTREPRVVVHTCSDVNILDGGYRWWKYGRNVVKGNPNPRSYYKCRHLGCPVRKFVQRALHESAIVTTTYEGNHNHGTPYQLSH 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1929 284 MobiDBLite consensus disorder prediction 131 180 - -
Dere04g1929 284 MobiDBLite consensus disorder prediction 132 168 - -
Dere04g1929 284 Gene3D WRKY domain 206 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g1929 284 Pfam WRKY DNA -binding domain 222 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1929 284 Pfam WRKY DNA -binding domain 80 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1929 284 SUPERFAMILY WRKY DNA-binding domain 76 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g1929 284 SUPERFAMILY WRKY DNA-binding domain 211 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g1929 284 Gene3D WRKY domain 67 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g1929 284 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 279 IPR044810 GO:0003700
Dere04g1929 284 SMART WRKY_cls 79 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1929 284 SMART WRKY_cls 219 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1929 284 ProSiteProfiles WRKY domain profile. 74 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1929 284 ProSiteProfiles WRKY domain profile. 214 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1929 Dere-ChrDere04 22064751 22065928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1929 67 279 WRKY Transcription Factor Family AT5G07100 49.302 1.53e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere04g1929 WRKY 4.6e-20 CL0274