Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1921 ATGGGCCCAGTGGGACGTACCACTATGGATTCTGAAAATCTTTCAATGGGTTCTGATGTTGATTACTCGGCCCTACAATTTGGATGGAATTTTCGTGTTATGAAACCCTCGTGCATGGCTAGGTTTCTACCACAACCACGCAACGAATGGCGGTGGCACTTTCATCGTCCTTCTCACCATGTCTCCGTCTCCACGAATATCCAAAATAATGAAATCGGTACCTTCGTGACTCCCATCACTTGTACTCACACCCCCGATGTTCGAACTAGTGGCATCTTCTTTGGAGAAAATCCTTTGCGCTACACCTTCACCCTCATTCTCTTCGAGTTCAGTCTCCTCGTCATCATCACCCGCTTCATCCGTTTCCTCCTTAAGCCTCTCAAACAACCTAGGATCATCTCCGAGATCATCGGTGGCATCTTGGTGGGGCCCTCAGTTCTGCGACGCCACACATGGTTCGCAAACAACATAGTCCCCCTAAATGCCGACTTTGTAGCCAACAATATTGGGGTAATGGGCTTCATGTTCTATCTTTTCGTGTACGGTGTGAAGATGGACGCTAGCCTCGTAAGAAATTCTGGGAAAAAGCATATCTGTACAGCTTTAATAAGTACGATCGTTCCCACAATATCATCCTTTTCTGTGGCAATGGCCATGAGGAAGGACATGGACAAAGAGCTCGCCAAGATAGCTTCAATAGGTGGCATCGCCGGCTACTTCGGACTCACGTCATGTCCTGTCCTATACGGTGTCCTTAGAGAGAACAACCTTCTAAGTTCCGAAGTGGGTCGAACGGCGTTATCCACTGCATTAATTGGTGACATATTGAGTGTGGGTATCATAGTGGTGTTTGAGGCTGGAAAGCAAGGTGAATCAGGAGCTATGCTTGCCGTGTGGTATTTGATTTCTCTTGGGATTTTGGTGACCTTTTTGGTGATATGTATCAGAAAAGCGATAGAGTGGATTATTGAGAAAACCCCAGAAGGGCAAGCAGTGAACCAGTCTTATGTAGTTCTGATTCTGTTGGGGATTTTTGTGACGGGGTTTATGACAGACATGTGTGGGATGGCCATTGCTAACGGATCGTTATGGCTAGGGTTGGTGATTCCGGATGGTCCTCCTTTGGGTTCAACGATTGTGGAGAAGAGTGAGGCAATTATGATGGAGTTGCTTATGCCCTTCGCGTTCCTTATGATAGGGTATAATACTGATGTGTATGCCATGGGCGCTGCTGGATGGTCCAATTTGGCTCCATTGTTCTTCATGGCTTTAACTGGCTATCTGACCAAGTTTGTTTCTACTTGGATTGCTATTATCTATTATTGGCGTATGCCTTTCAGAGAAGGACTAGCCCTCAGTCTTATCTTGAGCTTAAGGGGCCATGTTGAACTTATATTGTTTGTCCATTGGATGGACAAAAAGATGATAAAGCCGCCAGGATTCACCATACTGGTGCTGATGACAACAGCACTAACAGCAACATTTACTCCTCTGATCTGCATCCTCTACGATCCATCAAAGCCATACATGGTGAACAAAAGGAGAACCATTCAACACACCCCTCCCAACACAGACCTCGTTATTGTCCTCTCCATCCTCGACAAAGAAAGCACGAGTGGCCTCATTAACCTCCTCGAACTTACCCCTCCCACCTCTACAAACCCCAGCTCCATCTTCGCCCTTCACCTCATAGAGCTCGTAGGCCGAACCAGCCCTGTCTTCATCGACCACGATAAACAACGAGTCCCTCCTAAATACAAATGCGCCCTCACCATCAACGCCCTCACGCTCTTCCAAGAACTCAGAGGCACCGACTTCGTTAAGCTTCGTATATTCACAACCGTCACTTCCAAGCGAACAATGTACCAAGACATATGCGAGCTAGCCTTAGAGCACAAAGCTGCTTTAATCATTTTACCCTATCATAAGGGAGCTATGATTCACAACCTCGAAGGAGCCTTAGTAATGGGAGACGGAGCACGAACCGTGACATCCAACGTTTTAACTCACGCACCTTGCTCTGTCGGAATTCTTGTCGACAAGAGTGCGAGTCTCGGAAACCCCGTCGTGGGACACAGCTTGTTTCGTCGGTCAAAAAACAACCTTGCTATGTTGTTTCTTGGAGGAGCGGATTGTAGAGAGGCTTTGTATTATGTGGATCGGATGGTTGCGGACAATGAAGAGGTGAATCTGACGGTGGTGAGGTTTCTGCCGTTTAACTATGAAGGGGATAGTGACATGGAGAAGAAGCTGGATGACGGAACGGTGACGTGGTTTTGGGTGAAGAATGAGCGAAACGAAAGAGTGGAGTACAGAGAGGTAGTGGTTGCGAACGGAGAGGAGACGGTGATGGCCATTCAGACGATGAACGATGGGAGGTATGATCTTTGGATAGTGGGAAGAAAACAAGGAATGAATCCTGTGCTTCTCAGTGGGTTGTCCAATTGGAGTGAGAATGAAGAGTTGGGACTCATAGGAGATTTCGTTGCCTCTGTAGATTTTAGTGGTTCTGCTTCTCTTTTAGTTATACAGCAACAAATCCTGAGGGGGTAA 2553 0.47 MGPVGRTTMDSENLSMGSDVDYSALQFGWNFRVMKPSCMARFLPQPRNEWRWHFHRPSHHVSVSTNIQNNEIGTFVTPITCTHTPDVRTSGIFFGENPLRYTFTLILFEFSLLVIITRFIRFLLKPLKQPRIISEIIGGILVGPSVLRRHTWFANNIVPLNADFVANNIGVMGFMFYLFVYGVKMDASLVRNSGKKHICTALISTIVPTISSFSVAMAMRKDMDKELAKIASIGGIAGYFGLTSCPVLYGVLRENNLLSSEVGRTALSTALIGDILSVGIIVVFEAGKQGESGAMLAVWYLISLGILVTFLVICIRKAIEWIIEKTPEGQAVNQSYVVLILLGIFVTGFMTDMCGMAIANGSLWLGLVIPDGPPLGSTIVEKSEAIMMELLMPFAFLMIGYNTDVYAMGAAGWSNLAPLFFMALTGYLTKFVSTWIAIIYYWRMPFREGLALSLILSLRGHVELILFVHWMDKKMIKPPGFTILVLMTTALTATFTPLICILYDPSKPYMVNKRRTIQHTPPNTDLVIVLSILDKESTSGLINLLELTPPTSTNPSSIFALHLIELVGRTSPVFIDHDKQRVPPKYKCALTINALTLFQELRGTDFVKLRIFTTVTSKRTMYQDICELALEHKAALIILPYHKGAMIHNLEGALVMGDGARTVTSNVLTHAPCSVGILVDKSASLGNPVVGHSLFRRSKNNLAMLFLGGADCREALYYVDRMVADNEEVNLTVVRFLPFNYEGDSDMEKKLDDGTVTWFWVKNERNERVEYREVVVANGEETVMAIQTMNDGRYDLWIVGRKQGMNPVLLSGLSNWSENEELGLIGDFVASVDFSGSASLLVIQQQILRG 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1921 850 PANTHER CATION/H + ANTIPORTER 81 846 - -
Dere04g1921 850 Gene3D - 104 506 IPR038770 -
Dere04g1921 850 CDD USP_Like 625 675 - -
Dere04g1921 850 Pfam Sodium/hydrogen exchanger family 112 496 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1921 Dere-ChrDere04 21992392 21996639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1921 78 847 Antiporter Super Family AT5G58460 44.403 0.0 701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1921 04 21992392 21996639 Dere04g1921 04 21992392 21996639 ECH