Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1919 ATGGCCACGGACGTAACGGCCAAATTCCAAAACCCCGATTTTCACCCCGTTCCGCAGCCACCAGATTTCCATCGAGAGCTCACCGAGTCAGCTCATGATGGCCTCCATTTTTGGCAGTTCATGATCGCCGGTTCCATCGCCGGCTGCGTCGAGCACATGGCAATGTTCCCTGTTGACACCGTGAAGACCCATATGCAAGCTCTCGGGTCATGTCCGATTAAGTCCGTTAGCGTTCGCCAAGCCCTTCAATCGATTTTGAAATCTGAGGGTCCATCTGCACTATACCGTGGGATAGGCGCAATGGGTCTCGGTGCTGGACCAGCACACGCTGTGTATTTTTCCGTTTATGAGATGTGTAAGAAGTATTTCTCTCATGGGGATCCCAAAAATTCCACTGCCCATGCGATTTCTGGTGTATGTGCTACTGTTGCGAGCGATGCTGTGTTAACGCCCATGGATATGGTGAAGCAGAGATTGCAATTGAGTAATAGTGGTTACAAGGGTGTTTGGGACTGTGTAAAGAGGGTTTTAAGTGAGGAGGGTTTAGGGGCATTTTATGTATCTTATAGGACTACAGTTTTGATGAACGCACCATTTACAGCAGTGCATTTTGCGACTTATGAGGCTGCAAAAAGAGGTCTCACGGAGATTTCGCCCGATAGTGCTGACGATGAACGTTTGGTTGTTCATGCAACTGCTGGAGCCGCTGCTGGTGCCTTGGCTGCTGCTGTTACCACACCGCTTGATGTGGTTAAAACTCAATTGCAGTGTCAGGGCGTATGCGGATGTGATAGATTTAAAAGTGGTTCAATTGCGGATGTTATTAAAACTATAGTGAAAAAGGATGGATACAGGGGGCTCATGCGAGGATGGATACCTAGGATGCTGTTCCATGCTCCTGCGGCTGCTATCTGCTGGTCCACATATGAAGCTGGAAAGGCCTTTTTTCAAGAATTCAATCAAAGACAAGACAATGACACTGTTAACCAATGA 993 0.4804 MATDVTAKFQNPDFHPVPQPPDFHRELTESAHDGLHFWQFMIAGSIAGCVEHMAMFPVDTVKTHMQALGSCPIKSVSVRQALQSILKSEGPSALYRGIGAMGLGAGPAHAVYFSVYEMCKKYFSHGDPKNSTAHAISGVCATVASDAVLTPMDMVKQRLQLSNSGYKGVWDCVKRVLSEEGLGAFYVSYRTTVLMNAPFTAVHFATYEAAKRGLTEISPDSADDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIADVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKAFFQEFNQRQDNDTVNQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1919 330 FunFam Mitochondrial carrier protein, expressed 130 324 - -
Dere04g1919 330 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Dere04g1919 330 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Dere04g1919 330 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Dere04g1919 330 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Dere04g1919 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Dere04g1919 330 Pfam Mitochondrial carrier protein 226 318 IPR018108 -
Dere04g1919 330 Pfam Mitochondrial carrier protein 130 215 IPR018108 -
Dere04g1919 330 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Dere04g1919 330 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
Dere04g1919 330 Gene3D Mitochondrial carrier domain 130 329 IPR023395 -
Dere04g1919 330 PANTHER MITOFERRIN-1-RELATED 28 320 - -
Dere04g1919 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Dere04g1919 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1919 Dere-ChrDere04 21961778 21963970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1919 136 326 Chloroplast and Mitochondria Gene Families AT1G07030 28.351 1.31e-14 71.6