Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1905 ATGCTTGTTCAGATTATTCAAAGGAGCTACGAAATGTATCATTTCAACCTTAAGACCGACACTGAATGTATCATTTCACGTAGAACACTCAGCAAGAAAGCTTCCACATTTACCTACACTTTCTTCCGTCGCTGCACTGAGATGAAGTACTTTTACACTGCAATGCTTAGCAGAGATAAGATGGGTTACAGTTCATTGCTTCGAAGCCCAAAGAAAGAGGAGCAACAAGTACGCGATGCTCCCATCCCCAGATTACCCGACTCCACCAAAGCTTACTCCATCGAAGATTTCGATGTTTTGGGTGAACTGGACGACGGCGTTTTGGGCACCGAACACGACGACGAAACTTTACCGCACCACAAATCTTACAGTGGCCACCTCAATTGGGACTTCATGGAGTTGGAGGGATTTTCAGCCGAAGCAGAAGTAGATGGTGAAGAAGAAACAAAGAGCAAATGCCTTGTGGGTGATGAGCAGATCATAAAGAGAGAAATTGTTGGGTTTATGGAGGAAGACGATGAGAAGATGGTGTCTTTGAACTTGAACTTGAACTATCAAGAGGTTTTGGATGCCTGGTCTGATCGTGGCTCTCTCTGGGCTGACGATTATTCTCTTTCAATGGCCTCTAGCAATAATGGCTATTACTATATGGGAGAAGTTCCGATTCTGGAGGAAGAGAGAGCGAGAAGGGAGGCAAGTGTTCTAAGGTACAAAGAGAAGCGTCAAAGCAGATTGTTCTCCAAGAAGATAAGATACGAAGTTCGGAAACTAAATGCTGATAAAAGACCCAGAATCAAGGGCCGCTTTGTGAAGAGACTTTAA 822 0.4416 MLVQIIQRSYEMYHFNLKTDTECIISRRTLSKKASTFTYTFFRRCTEMKYFYTAMLSRDKMGYSSLLRSPKKEEQQVRDAPIPRLPDSTKAYSIEDFDVLGELDDGVLGTEHDDETLPHHKSYSGHLNWDFMELEGFSAEAEVDGEEETKSKCLVGDEQIIKREIVGFMEEDDEKMVSLNLNLNYQEVLDAWSDRGSLWADDYSLSMASSNNGYYYMGEVPILEEERARREASVLRYKEKRQSRLFSKKIRYEVRKLNADKRPRIKGRFVKRL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1905 273 ProSiteProfiles CCT domain profile. 230 272 IPR010402 GO:0005515
Dere04g1905 273 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 106 272 - -
Dere04g1905 273 Pfam CCT motif 230 272 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1905 Dere-ChrDere04 21855125 21856989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1905 151 272 C2C2-CO-like Transcription Factor Family AT1G73870 43.165 2.09e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere04g1905 CCT 6.2e-19 CL0281