Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1893 ATGGCGGCTGCCTTGGAGTGTTGGTCCAGCCGGGCGAGCACAGACGAGGACATGGTGGAACAGGTTCTGATGACGGCCCAAGATAGATCCGAGGGCCTAACGCCGGTGAGCTCTTCCGGCAATGGAACCAAGGATTTGTCCCTTGTGCAGAAGAAATTGCAGAAGCTGAGTCGGAACGTTTCCGAGGCAATTGCCTCGCTCAAGAACTCACTCAATCGGGATTCTGCTCGCGAACCATCTTCCAAGATTGATGATGGTCCTCAAAAAGTTGTGTGGGGAAGTGTTGTACGGAATCTTACACAGCTCTATCCTGGCAGTCAGCTTCCAGATGAGCTCATGTCCAACATTCGCAAGCATTACGATTCGTTGCCTCCCAGTTATGCTCAGGCGGAGTTCGATATGAAGGATATATTTCTTCACATCAAATTGATAGAGCAAGCATCAGCAGATAACCAGCCTGCAATTGTAATTCAAGAAGAGTCTGATAATGAAATTCAGGGGTCTGTATTCAAGCTGACATTTGCTTGTAGCTCTCCATTTTCATGGTCGGCAATGTCCAGTGCAATGGATGGTTCAACTATTTGCTGCAAGAAGGTACAGATCTTTGAGAAGAAAGGTTATACGCTTGGGATTGTCCTTCTTCTTGTTCAATCTGGGCATGATAGATTGATCAGAAAGCAGGTTGAAAGCGCCGTGAAATTTGCTATGAAAAAATCCAAAACTAGTTCTGTGAAGCTTCCCTTTGGGCTCTGTGGATGTCAAGAAGAGAACTCCAAGGGGAGAGAAGTCGGAGAGATTGAAGAAGACTGTAGTAATACGTCTTGTGGAAAAGGGTATGAGAATTTAAACCCAAAGGTTCAGATTCCGATGCCCCTACCCACTTCGTCGATTCTTGTACCCATAGATGAATGGCAGACGATTCAGTCAGGTAAAGATGAGATAGAAAAATGGCTGCTGAACTCAGATAGTCTTGATTTTGTAGAACAAATTGGACCTAATTCTTTTAAGGGTGTCTACATAGGCAAAAAAGTTGGAATCGAGAAGCTTAAAGGGTGTGACAAAGGAAATTCTTACAAGTTTGAGCTTCGTAGAGATCTGCTGGAACTGATGACTTGTGAGCACAAAAACATTCTGCAGTTCTGTGGTGTTTGTATAGACGAGAATCATGGGTTATGTGTGGTGACGAAGTTCATGGAAGGTGGGTCAGTTAATGACTTAATGCTCAAGAACAAGAAGCTTCAGACTAAGGATATCATTAGAATTGTAGTTGATGTCGCTGAAGGGATCGAATTTATGAATGATCACGGTGTTGCATACAGAGACCTCAATACACAGAGGATTTTATTGGATCGACATGGGAATGCTTGCCTGGGAGATATGGGTATAGTCACTGCTTGCAAAAGTGTTGGAGAGGCCATGGAGTACGAGACTGATGGTTATCGGTGGTTAGCTCCAGAGATAATTGCTGGTGACCCAGAGAGCGTGAGCGAGACATGGATGAGTAACGTTTACAGTTTTGGGATGGTATTATGGGAGATGCTTGCTGGTGAGGCAGCCTATTCTGCTTATTCACCTGTGCAAGCTGCAGTGGGCATTGCTGCTTGTGGCCTTCGACCTGAGATCCCCGAGGACTGCCCTCGAACTCTAAAATCTCTCATGACCAAGTGCTGGAACAACTCCCCTTCCAATCGCCCTCATTTCTCAGAAATCTTACCTTTATTGCTGCCACCAAACAACAACAATAGGTAA 1749 0.4517 MAAALECWSSRASTDEDMVEQVLMTAQDRSEGLTPVSSSGNGTKDLSLVQKKLQKLSRNVSEAIASLKNSLNRDSAREPSSKIDDGPQKVVWGSVVRNLTQLYPGSQLPDELMSNIRKHYDSLPPSYAQAEFDMKDIFLHIKLIEQASADNQPAIVIQEESDNEIQGSVFKLTFACSSPFSWSAMSSAMDGSTICCKKVQIFEKKGYTLGIVLLLVQSGHDRLIRKQVESAVKFAMKKSKTSSVKLPFGLCGCQEENSKGREVGEIEEDCSNTSCGKGYENLNPKVQIPMPLPTSSILVPIDEWQTIQSGKDEIEKWLLNSDSLDFVEQIGPNSFKGVYIGKKVGIEKLKGCDKGNSYKFELRRDLLELMTCEHKNILQFCGVCIDENHGLCVVTKFMEGGSVNDLMLKNKKLQTKDIIRIVVDVAEGIEFMNDHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVLWEMLAGEAAYSAYSPVQAAVGIAACGLRPEIPEDCPRTLKSLMTKCWNNSPSNRPHFSEILPLLLPPNNNNR 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1893 582 Gene3D Transferase(Phosphotransferase) domain 1 317 575 - -
Dere04g1893 582 Coils Coil 53 73 - -
Dere04g1893 582 PRINTS Tyrosine kinase catalytic domain signature 431 449 IPR001245 GO:0004672|GO:0006468
Dere04g1893 582 PRINTS Tyrosine kinase catalytic domain signature 395 408 IPR001245 GO:0004672|GO:0006468
Dere04g1893 582 PRINTS Tyrosine kinase catalytic domain signature 501 523 IPR001245 GO:0004672|GO:0006468
Dere04g1893 582 PRINTS Tyrosine kinase catalytic domain signature 545 567 IPR001245 GO:0004672|GO:0006468
Dere04g1893 582 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 128 574 - -
Dere04g1893 582 Pfam Protein tyrosine and serine/threonine kinase 356 572 IPR001245 GO:0004672|GO:0006468
Dere04g1893 582 ProSiteProfiles Protein kinase domain profile. 324 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1893 582 SUPERFAMILY Protein kinase-like (PK-like) 300 572 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1893 Dere-ChrDere04 21670493 21674640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1893 307 574 MAP Kinase Kinase Kinase AT2G17700 33.818 2.94e-51 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Dere04g1893 PK_Tyr_Ser-Thr 1e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1893 04 21670493 21674640 Dere04g1893 04 21670493 21674640 ECH