Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1888 ATGGCTGCCGGTGATGAGTCTTCGGTTACTATACCCCTTCTGTTCGATGGGAAGCAACAAGGAGTCATTTATGACACCAAAGATGGTGATCTACACGACGCCGTTTCTGTCGGCAATGCCTGTTTTTTCAAGACCTGCTTCCATGGGGTTAATGCAATCTCAGGAATTGGCATAGTGTCCATACCGTACGCACTGGCCTCTGGGGGATGGTTAAGCATATCGCTGCTATTTCTGATCGCCATAGCTTGTTACTACACAGGCATACTGGTCCAAAGATGCATGGACATGGACCCTAATATCAGGACCTTCTCTGACATAGGCCAACGTGCATTCGGAGACAAAGGAAGACTAATGGTTTCCATAGCCATGAACTCCGAGCTCTACCTTGTCGTCACAGGCTACCTCATTCTAGAAGGTGACAACTTAAACAAGCTAATACCCAACGTCCAAATTCACATAGCAGGTTTAACAATCGAAGGAACCACACTTTTTGCCATACTTGCTGCACTTGTTATACTGCCTACTGTGTGGTTACAAGACCTGAGCCTCCTCTCTTATGTGTCTGCAAGTGGAGCCCTGGCTTCAACTATCTTCCTCATCTCTCTGTTGTGGAATGGCACTATTGATGGAACTGGGTTTCATGGCAAGGGAACAGTTTTTAAATGGAGAGGCATTCCTGCGGCTGTCAGTTTGTATGCTTTCTGTTACAGTGCTCATCCAGTCTTGCCCACTCTCTATACTTCCATGAGAAACAGAAGCCAGTTCTCCAGTGTGTTGCTTGTATGCTTTTCATTGTGCACTCTTGGTTATGCAGCAGCAGCAGTGTTGGGTTACTTGATGTTTGGAGAAGACGTTCAATCCCAAGTCACTCTGAACCTTCCCACAGGCAAATTTAGTTCACAAGTGGCAATATACACCACCTTGGTCAATCCCATAGCCAAATACGCCTTGATGCTTACCCCAATAGTGAATGCTACAAAAAATATGATTCCTTGTCATTATAACAAAAGGCTTACCCATCTGTTTGTGAGCACTTCCTTGCTCATCAGTACTCTCATTGTAGCCGTTGCTGTGCCATTGTTTGGGTACCTCATGTCACTTGTGGGAGCATTACTCAGTGTCTCTGCTTCGATTCTGGTGCCATCAGTTTGCTACTTGAAGATTTCTGGAGCATACAGGAGATTTGGTGGTGATATGATCATCAACTATTCAATAATACTGATGGGGGTCGCTATTGCTGCTGTAGGTACTTACACGTCTCTTTTGGATATAGTTGGCCATTTGTAG 1287 0.4522 MAAGDESSVTIPLLFDGKQQGVIYDTKDGDLHDAVSVGNACFFKTCFHGVNAISGIGIVSIPYALASGGWLSISLLFLIAIACYYTGILVQRCMDMDPNIRTFSDIGQRAFGDKGRLMVSIAMNSELYLVVTGYLILEGDNLNKLIPNVQIHIAGLTIEGTTLFAILAALVILPTVWLQDLSLLSYVSASGALASTIFLISLLWNGTIDGTGFHGKGTVFKWRGIPAAVSLYAFCYSAHPVLPTLYTSMRNRSQFSSVLLVCFSLCTLGYAAAAVLGYLMFGEDVQSQVTLNLPTGKFSSQVAIYTTLVNPIAKYALMLTPIVNATKNMIPCHYNKRLTHLFVSTSLLISTLIVAVAVPLFGYLMSLVGALLSVSASILVPSVCYLKISGAYRRFGGDMIINYSIILMGVAIAAVGTYTSLLDIVGHL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1888 428 PANTHER OS05G0424000 PROTEIN-RELATED 47 416 - -
Dere04g1888 428 Pfam Transmembrane amino acid transporter protein 42 420 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1888 Dere-ChrDere04 21606069 21609725 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1888 27 426 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.611 9.13e-161 457