Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1883 ATGTCCATGGGTGCTGAACACAACGACAAGGTGGTTACTATACCCCTTCTGTTCGATGAAAAGCTGCATCCAAACGACGCCGTTCCTGAGGGCAACACCTCCTTTTTCAAGACCTGCTTCCATGGGGTTAATGCAATCTCAGGAATTGGCATTGTGTCCATTCCATACGCCATGGCATCAGGAGGATGGTTGAGCATATCGCTGCTATTTCTAATCGCCATTGCTTGTTACCACACAGGCATACTGGTCCAAAGATGCATGGACATGGACCCTAACATCAGGTCCTTCCCTGACATAGGCCAACGTGCATTCGGAGACAAAGGAAGACTAATGGTTTCCATAGCCATGAACTCCGAGCTCTACCTTGTCGTCACAGGCTACCTCATTCTCGAAGGGGACAATATAAACAAGCTAATAGCCGACGTCCAAATTGACATAGGAGGGCTTACAATTGGAGGAACCACACTCTCTGCCATACTTGCTGCACTTGTTATATTGCCTACTGTGTGGTTACAAGACCTGAGCCTCCTCTCATATGTGTCTGCAAGCGGAGCCTTGGCTTCTACTGTCTTCATCATGTCTCTGTTGTGGAACGGTACTATTGATGGAACTGGGTTTCATGGGAAAGGAACTCTTTTCAGATTGAAGGGAATTCCTTCTGCTGTGGGTTTGTATGCCTTCTGTTACAGTGCTCATCCAGTCTTGCCCACTCTCTATACTTCTATGAGAAACAGAAGCCAGTTCTCCAATGTGATGCTTGTATGCTTTTCACTGTGCACTCTTGGCTATGCAGCAGCAGCTGTGCTGGGCTACTTGATGTTTGGAGAAGACGTTCAATCCCAGGTCACTCTGAACCTTCCCACAGGCAAACTAAGCTCAAAAGTGGCAATCTACACCACCTTGGTCAATCCCATAGCCAAATACGCCTTAATGCTTAGCCCAACCATAAACGCCGCAAAAAATATGATTCCTTGTCATTACAACAGAAGGCTCAAACATCTGCTTGTAAGCACCTCCATGCTCATCAGCACTCTCATTGTAGCCATTGCGATTCCACTATATGGGTACCTCATGTCACTTGCGGGGGCATTACTCAGTGTCTCGGCTTCAATTCTGGTGCCATCAGTTTGCTACTTGAAGATTTCTGGAGCTTACAGGCGATTTGGTTCTGAAATGATCATCAATTATTCTATAATAACGATGGGGGTTGCTATTGCTGTTGTAGGTACTTACTCTTCTCTTCTGGATATAATTGGCCATTTGTAG 1266 0.4613 MSMGAEHNDKVVTIPLLFDEKLHPNDAVPEGNTSFFKTCFHGVNAISGIGIVSIPYAMASGGWLSISLLFLIAIACYHTGILVQRCMDMDPNIRSFPDIGQRAFGDKGRLMVSIAMNSELYLVVTGYLILEGDNINKLIADVQIDIGGLTIGGTTLSAILAALVILPTVWLQDLSLLSYVSASGALASTVFIMSLLWNGTIDGTGFHGKGTLFRLKGIPSAVGLYAFCYSAHPVLPTLYTSMRNRSQFSNVMLVCFSLCTLGYAAAAVLGYLMFGEDVQSQVTLNLPTGKLSSKVAIYTTLVNPIAKYALMLSPTINAAKNMIPCHYNRRLKHLLVSTSMLISTLIVAIAIPLYGYLMSLAGALLSVSASILVPSVCYLKISGAYRRFGSEMIINYSIITMGVAIAVVGTYSSLLDIIGHL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1883 421 Pfam Transmembrane amino acid transporter protein 32 413 IPR013057 -
Dere04g1883 421 PANTHER AMINO ACID TRANSPORTER 29 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1883 Dere-ChrDere04 21556029 21561597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1883 19 419 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.726 1.95e-157 448