Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1879 ATGGGAAGCTTGGAAATGATCATTGGAGCTGCCTCAACACAAGTAGAGGAACCATCGAAGGAATTACCTTCAACTGAACTGACCTTAGGAATTGGTTCATATTATCAAGCAACATGGCCAAATCATAATAAGAGCCTTGGTTATGCAACGGGAACCTCTGATCCCGCACTAGGAGAACACCACAATAATGACAAGATTATGGTGGACCTAACTCTTGATGATCTCGACGCAAAGAATTCCATCGATGGCCTTGGTCTTGGTGTTCCAACTGAAGATGAAGACCAAGCCATTCACATTTTGGACTCAAGTCGCAACCAAGAAATGGATCCCAAGAAGCTCAAGCGAATCATGTCAAACCGACTTTCTGCAAAGAGATCCAGAGCAAGGAGAAATCAGCATGTAGCAGAGATGGAGAGGCAAGCAAAATTTTTGGAGGCTAAGATAGCCCTTCTTCAACCACAAGTTGCGGCTTATGAAAATCAACAACGCCTCTTGCTGATTGAGCAACACCAAGTGAAACTACGAATGGCTGCTCTTGAAAAAGAGAGGATACTCAAAGAAGATGAAATGGAAAAGATGAAAGCTGAAATAGATAGGCTGAGAGAACTTCAGAGGAATAAAGAGCAAATTCAAGCACAAGAAATGATGCGTAGTTGGGGTGCTGACATGAAGCTAATGTGCAATCCCAGCCCTAGCTCAAACCCATCTGGCTTGGGACCAATGATTGACATAAACTCAGTTCAAGTTCAAGCATACTGTTGTTTTTTGGGTTTCACGAGTAAACCTTTCCCAACTTATCAAACGGACTATAATTTGGGCCATAAGAACCGTGGGCTACTCTTTGGGCCCACGTTGATCCATTCCATAAAATCGATAAGGACGTTTCTCGTGCTCGTTACTCATTGGGAAGGTGCTTACTGTGTAGCCCCGGTTGGTACACGTATCCTCACGCTAAATGCTCAATTCTGTCACTACTCACTGGCCTCAACAGTTGTGAGCTATCCTTTCTTTTTTCTTTTTCTTGTTATGGTAGCAAAAGAAACCGACGGCATCCATTTTTGGGGTTTTCGTTCCTTCATTTTAATGGTGTTGTATTCCAATTTTCTTTTTCTGCTTTTTGTCTTTCGCTAA 1131 0.4271 MGSLEMIIGAASTQVEEPSKELPSTELTLGIGSYYQATWPNHNKSLGYATGTSDPALGEHHNNDKIMVDLTLDDLDAKNSIDGLGLGVPTEDEDQAIHILDSSRNQEMDPKKLKRIMSNRLSAKRSRARRNQHVAEMERQAKFLEAKIALLQPQVAAYENQQRLLLIEQHQVKLRMAALEKERILKEDEMEKMKAEIDRLRELQRNKEQIQAQEMMRSWGADMKLMCNPSPSSNPSGLGPMIDINSVQVQAYCCFLGFTSKPFPTYQTDYNLGHKNRGLLFGPTLIHSIKSIRTFLVLVTHWEGAYCVAPVGTRILTLNAQFCHYSLASTVVSYPFFFLFLVMVAKETDGIHFWGFRSFILMVLYSNFLFLLFVFR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1879 376 Pfam Basic region leucine zipper 109 160 IPR004827 GO:0003700|GO:0006355
Dere04g1879 376 Coils Coil 127 147 - -
Dere04g1879 376 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 161 IPR004827 GO:0003700|GO:0006355
Dere04g1879 376 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
Dere04g1879 376 SUPERFAMILY Leucine zipper domain 111 165 IPR046347 GO:0003700|GO:0006355
Dere04g1879 376 Coils Coil 176 213 - -
Dere04g1879 376 PANTHER BASIC LEUCINE ZIPPER 34 101 215 - -
Dere04g1879 376 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 114 129 IPR004827 GO:0003700|GO:0006355
Dere04g1879 376 Gene3D - 110 174 - -
Dere04g1879 376 CDD bZIP_plant_RF2 112 163 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1879 Dere-ChrDere04 21529949 21534182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1879 101 187 bZIP Transcription Factor Family AT2G42380 42.529 1.50e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere04g1879 bZIP_2 5.1e-10 CL0018