Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1873 ATGGAGTTCAAGAAGTTCATAATTAGAAGCTATGAGGGGCAATCTGATAGAGCTGAAGTGGAAGATCTCGAGAGAAGATGCGAGGTATGCCCAGCGGAAAGTGTGTTTCTCTTCACAGACACTATGGGTGACCCCATCTGTAGGATTCGAAACAGTCCCATGTACAACATGCTGGTCGCAGAGATGGACAAGGAGTTAATTGGGGTCATTCAAGGCTCGATAAAAGCGGTAGCAGTTCAAACTCATGACTTGGCCAAGGTAGGCTATGTATTGGGCCTAAGGGTGGCTCCAAATCATCGGCGGAAAGGGGTTGGCTCGAGCCTGGTTCAAAGGCTAGAAGAATGGTTCTGTTCCAACGATGTGGACTACGCATATATGAGCACAATGAAGGACAATCATGCCTCTGTTAGCCTCTTCATGGGCAAGTTTGGCTACACCAAGTTTAGAACTCCGGCTATACTTGTAAACCCAGTGAACCATCATTCCTTCAGAATCTCATCCAACATTGAGATAGCCAGGCTCAAAGTTGAACAAGCTGAATCACTTTACAGAAGGTTCATGGGTTCTTCTGAGTTCTTTCCTGATGATATAGACAGTATACTCAGGAACAAGCTAAGTTTGGGAACTTGGGTGGCTTATTTTAAAGGAGAAAGTTCATGGGGTGATTTTGGAAATGATGGTCAAGTTCCTAGTAATTGGGCTATGCTTAGTGTATGGAATAGTGGGGAAATCTTCAGGCTAAGGTTAGGCAAAGCAACTTTCTCTTGCTTGTTATATACAAAGAGTTGGTGTTTGATTGATAAGGTTTTCCCATGCTTGAAATTGCCAACTTTACCTGATCTCTTGAACCCATTTGGGTTTTATTTCATGTATGGGGTGTGTCATGAAGGGCCATTCTCTGGGAAGCTTGTGAGGGGGTTGTGCGAGTTTGTACACAGCATGGCTGCCAAGTCCGAGGATTGTGAGAACATCAAGATTGTTGTGACTGAAATTGGAGGAAGAGATGCTCTCAAGCATCATATCCCACACTGGAAATTGCTGTCTTGCCCGGAGGATTTGTGGTGCATAAAGGCCTTGAAAAAGGAAGCGGCTAACAGGTTTCGTGAACTGACCAATACCCCACCATCAAGAACTCTTTTTGTAGACCCAAGAGAGGTTTAA 1161 0.4453 MEFKKFIIRSYEGQSDRAEVEDLERRCEVCPAESVFLFTDTMGDPICRIRNSPMYNMLVAEMDKELIGVIQGSIKAVAVQTHDLAKVGYVLGLRVAPNHRRKGVGSSLVQRLEEWFCSNDVDYAYMSTMKDNHASVSLFMGKFGYTKFRTPAILVNPVNHHSFRISSNIEIARLKVEQAESLYRRFMGSSEFFPDDIDSILRNKLSLGTWVAYFKGESSWGDFGNDGQVPSNWAMLSVWNSGEIFRLRLGKATFSCLLYTKSWCLIDKVFPCLKLPTLPDLLNPFGFYFMYGVCHEGPFSGKLVRGLCEFVHSMAAKSEDCENIKIVVTEIGGRDALKHHIPHWKLLSCPEDLWCIKALKKEAANRFRELTNTPPSRTLFVDPREV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1873 386 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 386 - -
Dere04g1873 386 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 170 IPR000182 GO:0016747
Dere04g1873 386 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 148 IPR016181 -
Dere04g1873 386 CDD NAT_SF 57 125 - -
Dere04g1873 386 Gene3D - 14 152 - -
Dere04g1873 386 Pfam Acetyltransferase (GNAT) family 50 145 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1873 Dere-ChrDere04 21479475 21480735 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere04g1873 Acetyltransf_1 1e-14 CL0257