LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere04g1868	ATGAACCCATCTGAGCAATTTGTGGAACATGGGATATCTCAGCAGAATTTAAGGAAGACATCTTGTGCAACTGTGCTCACTCTGGCCTATCAAAGTCTTGGAGTGGTTTACGGTGACCTCAGCACTTCCCCTCTTTATGTTTACAAGACCACCTTCTCAGGGAAATTGAGCCTCAAAGAAGATGATGAGGAAATTTTTGGGGTGCTTTCATTTATTTTCTGGACTTTCACTGTTATTGCGCTCTTTAAATATGTATTCATCGTGATGTCTGCCGATGACAATGGTGAAGGAGGTACCTTTGCATTATACTCACTTCTTTGCCGACATGCAAGACTAAGCATATTACCTAATCAACAACCCACCGACGAGAAGTTGTCTGCTTATGCCACAGAAGACTCTGCAGACACCTGGCAGTCTGCTCTTCTGAAGTCCTTCTTTGAAAAGCACCTGAGGTTCCGAAAAGGTCTGCTGATATTTGTTCTGCTAGGAACCTGTATGGCAATTGGGGATGGTGTAATTACTCCTGCAATATCAGTTCTTTCGGCAGTTTCAGGAGTTAAAGTCAAAATCAGTCAACTCCATGAAAATTATGTAGTTATAATCTCATGTGTCATTTTAGTGGGCCTCTTCTCCATTCAGCATCATGGGACGCATAGAGTTGCTTTCTTGTTTGCTCCAGTTGTTGCAGCATGGCTTCTGTGTATCAGTGGTATTGGTATCTACAACATACTCCACTGGAACCCCCAAATATATCGTGCACTCTCTCCAGTATACATGTTGAGGTTCCTCAGGACCACAGGCATTGAAGGATGGCTCTCACTGGGGGGAGTGGTTCTTTCAATCACAGGTGTGGAGACAATGTTTGCTGACATTGGTCATTTTTCCGCACTCTCAATAAAGATAGCTTTCACATGTCTAGTATACCCCTGCCTGATTCTGGCATATATGGGCGAGGCTGCATTCCTCTCCAAGCACCATGATGACATTCAGAGAAGTTTTTACAAAGCCATACCAGAAACTGTTTTTTGGCCAGTGTTCATAGTGGCCACTTTTGCAGCTGTTGTAGGAAGTCAAGCAGTAATTTCTGCTACTTTTTCCATTATAAGCCAGTGCTGTGCGTTGAATTGTTTTCCTCGGGTGAAGATTATTCATACTTCAAGCAGAATTTATGGGCAGATTTACATCCCTGAAATCAATTGGATATTGATGTGCCTTACTCTGGCTGTCACTGTTGGCCTGAGGGATACAAACTTGATTGGTCATGCATATGGGCTGGCGGTCACCACTGTCATGTTTGTGACAACTTGCTTGATGATACTAGTAATTTTGATTGTGTGGAAGCAAGGAATTGTAAAAGCCATCGCATGTTTTCTCTTGTTTGGATCAATTGAACTACTTTACATCTCTGCTTCCATCTACAAGATCCCCCAAGGAGGGTGGATCCCACTGGTGCTATCTTTTATCTTCATGGGTATAATGTATACTTGGAACTATGGAACAATAAAGAAACACCAATTTGATGTGGAGAACAAGGTTTCAATGAGCAGAATACTATCTTTAGGACCTTGCCTAGGTATAGTCCGTGTCCCTGGAGTTGGACTTATTTACACTAATCTGGCTTCTGGTGTCCCTGCAATTTTTGGCCATTTTGTCACAAACTTGCCAGCGTTCCATCAGGTGCTAGTTTTTGTCTGTGTCAAATCTCTTCAAGTCCCTTTTGTTGGTGAGAATGAACGCTTGCTCATCAGTCGGGTTGGGCCAAAGGAATATGGTATGTTTCGTTGCATTGTCAGGTATGGTTACAAGGATCTACAGCAAGAGAACTATAATTTTGAGAATAGGTTGCTGTCTGGGATAGTCCAATTTGTAGAAACCGAGGAGGATAGTGTTCCAGAACCAACACATGAATTGTCTACAACTGTTGGAAATTTATATCCTGAAGAGAACTTGATTCCATCTTCAAATCTCTTGCGGGTGGTGAAAAGTAATAACGATGGCCATCTTAAAGAGTCATCTCTTTATAAAGAAGAGTCTCTGCAGATTCTGAGTGCCAAGGAGTCTGGTGTTGCCTATATACTTGGGCATTCCCATGCAAAGGCAAAGAAGTCATCATCCATCTTGAAGAAACTCGCAATAGATGTTGTCTTTGCTTTTCTAAGCAAGAATTGCAGAGAGCCTGATGTTGTTTTGAATGTGCCTCATACTTCTTTGCTGGAGGTTGGTATGATTTACTATGTCTAA	2241	0.4217	MNPSEQFVEHGISQQNLRKTSCATVLTLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLKEDDEEIFGVLSFIFWTFTVIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLSILPNQQPTDEKLSAYATEDSADTWQSALLKSFFEKHLRFRKGLLIFVLLGTCMAIGDGVITPAISVLSAVSGVKVKISQLHENYVVIISCVILVGLFSIQHHGTHRVAFLFAPVVAAWLLCISGIGIYNILHWNPQIYRALSPVYMLRFLRTTGIEGWLSLGGVVLSITGVETMFADIGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHDDIQRSFYKAIPETVFWPVFIVATFAAVVGSQAVISATFSIISQCCALNCFPRVKIIHTSSRIYGQIYIPEINWILMCLTLAVTVGLRDTNLIGHAYGLAVTTVMFVTTCLMILVILIVWKQGIVKAIACFLLFGSIELLYISASIYKIPQGGWIPLVLSFIFMGIMYTWNYGTIKKHQFDVENKVSMSRILSLGPCLGIVRVPGVGLIYTNLASGVPAIFGHFVTNLPAFHQVLVFVCVKSLQVPFVGENERLLISRVGPKEYGMFRCIVRYGYKDLQQENYNFENRLLSGIVQFVETEEDSVPEPTHELSTTVGNLYPEENLIPSSNLLRVVKSNNDGHLKESSLYKEESLQILSAKESGVAYILGHSHAKAKKSSSILKKLAIDVVFAFLSKNCREPDVVLNVPHTSLLEVGMIYYV	746

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere04g1868	746	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	17	745	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere04g1868	746	Pfam	K+ potassium transporter	30	603	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere04g1868	746	NCBIfam	potassium uptake protein	28	746	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere04g1868	Dere-ChrDere04	21431155	21435810	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere04g1868	122	746	Inorganic Solute Cotransporters	AT2G30070	70.240	0.0	917